RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 FAM209AQ5JX71 171 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 VN1R17PQ8TDU5 208 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 SRSF12Q8WXF0 261 aaKnown RBP10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 ELOVL5Q9NYP7 299 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 SLC25A37Q9NYZ2 338 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 TSPAN2O60636 221 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 APOBEC3AP31941 199 aaPredicted RBP10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 DDA1Q9BW61 102 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 PGFP49763 221 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 SIGLEC12Q96PQ1 595 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 CST9LQ9H4G1 147 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 COLCA1Q6ZS62 124 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 OR9G1Q8NH87 305 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 SOCS1O15524 211 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 IGLV3-27P01718 113 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 CT62P0C5K7 136 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 ZNF826PQ6ZT77 177 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 OR4D5Q8NGN0 318 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 ASB1Q9Y576 335 aa10.5□□□□□ -0.73
SLC6A6-210ENST00000622186 EIF3GO75821 320 aaKnown RBP eCLIP10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 CFHR1Q03591 330 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 GATA6Q92908 595 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 ZNF107Q9UII5 783 aaPredicted RBP10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 ANKRD26Q9UPS8 1709 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 MYEOVQ96EZ4 313 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 A0A1W2PQD3 144 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 E9PQ18 207 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 STAG3L3P0CL85 134 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 TMEM50BP56557 158 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 PRB3Q04118 309 aaPredicted RBP10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 LBHQ53QV2 105 aaPredicted RBP10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 CYB5R2Q6BCY4 276 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 MPC2O95563 127 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 KCNE1BA0A087WTH5 132 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 ARID1BQ8NFD5 2236 aaPredicted RBP10.49□□□□□ -0.73
SLC6A6-210ENST00000622186 ZFPL1O95159 310 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 CFDP00746 253 aaPredicted RBP10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 AMY1AP04745 511 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 IBA57Q5T440 356 aaKnown RBP10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 CTXND1A0A1B0GTU2 59 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 S100A7L2Q5SY68 101 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 TUBD1Q9UJT1 453 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 PLP1P60201 277 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 SRSF4Q08170 494 aaKnown RBP10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 PEAR1Q5VY43 1037 aaPredicted RBP10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 NEU4Q8WWR8 484 aaPredicted RBP10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 RBKSQ9H477 322 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 GNLYP22749 145 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 SMRP1Q8NCR6 262 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 OR5AN1Q8NGI8 311 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 LEAP2Q969E1 77 aa10.48□□□□□ -0.73
SLC6A6-210ENST00000622186 GCAP28676 217 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 AANATQ16613 207 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 FAM74A3Q4VXF1 159 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 MESTQ5EB52 335 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 PPP1R27Q86WC6 154 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 LRRC3BQ96PB8 259 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 CHCHD5Q9BSY4 110 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 PDE4DIPQ5VU43 2346 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 TRBV5-4A0A0C4DH59 114 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 OGG1O15527 345 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 MMP16P51512 607 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 MEF2CQ06413 473 aaPredicted RBP10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 SDF2L1Q9HCN8 221 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 KCNK7Q9Y2U2 307 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 MBD3L1Q8WWY6 194 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 CISD3P0C7P0 127 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 HOXA5P20719 270 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 EWSR1Q01844 656 aaKnown RBP eCLIP10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 CLEC19AQ6UXS0 136 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 DSPPQ9NZW4 1301 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 LINC01555Q8NAE3 123 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 FBXL7Q9UJT9 491 aa10.47□□□□□ -0.73
SLC6A6-210ENST00000622186 ATP5LO75964 103 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 OR2H2O95918 312 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 MS4A3Q96HJ5 214 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 NRIP2Q9BQI9 281 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 IGHV1-45A0A0A0MS14 117 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 C7orf66A4D0T2 115 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 SOD3P08294 240 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 TMEM136Q6ZRR5 245 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 MAVSQ7Z434 540 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 HSF4Q9ULV5 492 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 MYH2Q9UKX2 1941 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 A0A087WX48 190 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 UPK3AO75631 287 aa10.46□□□□□ -0.73
SLC6A6-210ENST00000622186 SPRED3Q2MJR0 410 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms