RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	HIPK2	Q9H2X6	1198 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045		A0A0G2JMM0	328 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045		A0A1W2PPB8	328 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045		A0A1W2PRS3	328 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	KIR3DP1	A8MWS1	328 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	NAPSA	O96009	420 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	NPPC	P23582	126 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	IMMP1L	Q96LU5	166 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	PSMG3	Q9BT73	122 aa	Predicted RBP	12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	SAMD10	Q9BYL1	202 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	MTCH1	Q9NZJ7	389 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	OR2W1	Q9Y3N9	320 aa		12.2	□□□□□ -0.46
SYNRG-231	ENST00000622045	WDR1	O75083	606 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	CBLN1	P23435	193 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	GDF1	P27539	372 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	THBS3	P49746	956 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	PINX1	Q96BK5	328 aa	Known RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	NEIL1	Q96FI4	390 aa	Predicted RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	ZNF716	A6NP11	495 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	SYNGR1	O43759	233 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	TNFSF13	O75888	250 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	COX6A1	P12074	109 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	SRP14	P37108	136 aa	Known RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	KRTDAP	P60985	99 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	RPL15	P61313	204 aa	Known RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	ETFRF1	Q6IPR1	90 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	RNASE8	Q8TDE3	154 aa	Known RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	WDYHV1	Q96HA8	205 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	TMEM9B	Q9NQ34	198 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045		F2Z2F3	143 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	UMOD	P07911	640 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	RFPL3S	P0C7P2	107 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	SRD5A2	P31213	254 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	ARF1	P84077	181 aa	Known RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	FFAR4	Q5NUL3	377 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	TIPARP	Q7Z3E1	657 aa	Known RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	ZNF114	Q8NC26	417 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	KCNE4	Q8WWG9	221 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	ASCL3	Q9NQ33	180 aa		12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	RYDEN	Q9NUL5	291 aa	Known RBP	12.19	□□□□□ -0.46
SYNRG-231	ENST00000622045	C11orf94	C9JXX5	98 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	TUSC2	O75896	110 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	IGKV1-39	P01597	117 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	IGKV1D-39	P04432	117 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	IL6R	P08887	468 aa	Predicted RBP	12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	OTX2	P32243	289 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	ZNF576	Q9H609	170 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A10P	A6NDY2	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A18P	A6NE21	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A16P	A6NEW6	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A20P	A6NIJ5	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A8P	A6NJQ4	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A7P	A6NKC0	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A22P	A8MWA6	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A12P	A8MX19	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A5P	A8MXJ8	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A23P	A8MXZ1	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	TMEM250	H0YL14	139 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	SERF1A	O75920	110 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	NDUFB4	O95168	129 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A15P	P0C7V4	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A13P	P0C7W8	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A14P	P0C7W9	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FAM90A24P	P0C7X0	464 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	TMEM183B	Q1AE95	376 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	SPINK9	Q5DT21	86 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	C20orf204	Q6ZNR8	217 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	BAGE3	Q86Y29	109 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	BAGE2	Q86Y30	109 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	DNPH1	O43598	174 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	CCL4	P13236	92 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	EPHA8	P29322	1005 aa	Predicted RBP	12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	TPTE2P1	Q5T6R2	138 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	PXMP4	Q9Y6I8	212 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	FREM1	Q5H8C1	2179 aa		12.18	□□□□□ -0.46
SYNRG-231	ENST00000622045	IGKV1-5	P01602	117 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	COL5A1-AS1	Q5SY13	56 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	HLA-C	Q95604	372 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	BTF3L4	Q96K17	158 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	CIB3	Q96Q77	187 aa	Predicted RBP	12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	C1QTNF5	Q9BXJ0	243 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	WDR54	Q9H977	334 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	OR1A1	Q9P1Q5	309 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	ATP5G3	P48201	142 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	TPPP2	P59282	170 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	AGBL5	Q8NDL9	886 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	OR5P3	Q8WZ94	311 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	PHF7	Q9BWX1	381 aa	Predicted RBP	12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	PRRG4	Q9BZD6	226 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	CRIM1	Q9NZV1	1036 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	PIGBOS1	A0A0B4J2F0	54 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	TYMS	P04818	313 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	TFF3	Q07654	80 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	RNF151	Q2KHN1	245 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	CEACAM21	Q3KPI0	293 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	ANKRD39	Q53RE8	183 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	RIPPLY2	Q5TAB7	128 aa		12.17	□□□□□ -0.46
SYNRG-231	ENST00000622045	NUFIP2	Q7Z417	695 aa	Known RBP	12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms