RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 SSTR5P35346 364 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 GLIPR1P48060 266 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 AARDQ4LEZ3 155 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 TMEM41BQ5BJD5 291 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 USF3Q68DE3 2245 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 BEND4Q6ZU67 534 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 TAF15Q92804 592 aaKnown RBP eCLIP7.87□□□□□ -1.15
PDPN-212ENST00000621990 RAB39BQ96DA2 213 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 MUCL1Q96DR8 90 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
PDPN-212ENST00000621990 OR4C12Q96R67 309 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 HSD17B10Q99714 261 aaKnown RBP7.87□□□□□ -1.15
PDPN-212ENST00000621990 VSIRQ9H7M9 311 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.87□□□□□ -1.15
PDPN-212ENST00000621990 LAMP3Q9UQV4 416 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 ZNF318Q5VUA4 2279 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 PMS2P5A8MQ11 134 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 C17orf98A8MV24 154 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 SRRM5B3KS81 715 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 UBE2CO00762 179 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 RAB29O14966 203 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 S1PR2O95136 353 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 ARG1P05089 322 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 ADH4P08319 380 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 BCL2P10415 239 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 G6PCP35575 357 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 SLC38A11Q08AI6 406 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 VWC2Q2TAL6 325 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 DEFB109BQ30KR1 87 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 SPANXN5Q5MJ07 72 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 HEPN1Q6WQI6 88 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 ZNF429Q86V71 674 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 IQCF2Q8IXL9 164 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 LILRB2Q8N423 598 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 FAM24BQ8N5W8 94 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 UFSP2Q9NUQ7 469 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 FZR1Q9UM11 496 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 BOD1L1Q8NFC6 3051 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 TTC28Q96AY4 2481 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 hCG_1809904A0A1W2PP81 198 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 A0A1W2PR64 198 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 A0A1W2PRV1 198 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 CXorf65A6NEN9 183 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 OR2C1O95371 312 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 KRASP01116 189 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 TFF1P04155 84 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 PRDX2P32119 198 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 RPL35P42766 123 aaKnown RBP7.87□□□□□ -1.15
PDPN-212ENST00000621990 ATP6V1FQ16864 119 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 SSX7Q7RTT5 188 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 ZNF808Q8N4W9 903 aaPredicted RBP7.87□□□□□ -1.15
PDPN-212ENST00000621990 LRRC29Q8WV35 223 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 PRR14LQ5THK1 2151 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 IGKV1D-17A0A075B6S4 117 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 LINC00473A8K010 186 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 CLDN1O95832 211 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 FBP1P09467 338 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 MSMPQ1L6U9 139 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 FAM90A2PQ658T7 463 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 ZNF787Q6DD87 383 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 ZADH2Q8N4Q0 377 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 TCTEX1D2Q8WW35 142 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 TVP23CQ96ET8 276 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 P2RX4Q99571 388 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 NIPSNAP3BQ9BS92 247 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 SIRT7Q9NRC8 400 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 URB1O60287 2271 aaKnown RBP7.86□□□□□ -1.15
PDPN-212ENST00000621990 LAMA5O15230 3695 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 B4DEV8 164 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 SPINT2O43291 252 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 IGHV3-13P01766 116 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 IGHV2-5P01817 119 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 EGR1P18146 543 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 MDKP21741 143 aaPredicted RBP7.86□□□□□ -1.15
PDPN-212ENST00000621990 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
PDPN-212ENST00000621990 DLK1P80370 383 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 ZNF816Q0VGE8 651 aaPredicted RBP7.86□□□□□ -1.15
PDPN-212ENST00000621990 EIF2S3LQ2VIR3 472 aaKnown RBP7.86□□□□□ -1.15
PDPN-212ENST00000621990 TIMM23BQ5SRD1 257 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 CIB3Q96Q77 187 aaPredicted RBP7.86□□□□□ -1.15
PDPN-212ENST00000621990 GNG13Q9P2W3 67 aa7.86□□□□□ -1.15
PDPN-212ENST00000621990 METTL1Q9UBP6 276 aaKnown RBP7.86□□□□□ -1.15
PDPN-212ENST00000621990 ZNF292O60281 2723 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 NBEAQ8NFP9 2946 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 UBE2L5PA0A1B0GUS4 154 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 FAM90A9PA6NNJ1 464 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 NDUFS6O75380 124 aaKnown RBP7.85□□□□□ -1.15
PDPN-212ENST00000621990 GZMHP20718 246 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 AKR1D1P51857 326 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 NKX6-1P78426 367 aaPredicted RBP7.85□□□□□ -1.15
PDPN-212ENST00000621990 OR2B11Q5JQS5 317 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 BTNL3Q6UXE8 466 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 MRGPRGQ86SM5 289 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 TPRX1Q8N7U7 411 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 OR2Z1Q8NG97 314 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 CA5BP1Q8WTZ4 195 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 TMEM147Q9BVK8 224 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 NCOR1P1Q9H4R4 102 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 ZNF665Q9H7R5 613 aa7.85□□□□□ -1.15
PDPN-212ENST00000621990 JPT1Q9UK76 154 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms