RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 NKX2-1P43699 371 aaPredicted RBP17.67■□□□□ 0.42
SPAST-204ENST00000621856 ZNF816Q0VGE8 651 aaPredicted RBP17.67■□□□□ 0.42
SPAST-204ENST00000621856 EXOSC2Q13868 293 aaKnown RBP17.67■□□□□ 0.42
SPAST-204ENST00000621856 CT45A1Q5HYN5 189 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 SLC51BQ86UW2 128 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 SPAG16Q8N0X2 631 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 TCTEX1D1Q8N7M0 179 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 CLEC18CQ8NCF0 446 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 CT45A3Q8NHU0 189 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 RAB1CQ92928 201 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 LSM10Q969L4 123 aaKnown RBP17.67■□□□□ 0.42
SPAST-204ENST00000621856 ZC4H2Q9NQZ6 224 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 RCL1Q9Y2P8 373 aaKnown RBP17.67■□□□□ 0.42
SPAST-204ENST00000621856 A0A0G2JRQ6 117 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 MSGN1A6NI15 193 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 C17orf98A8MV24 154 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 E5RGE8 158 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 NDUFA5Q16718 116 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 AQP10Q96PS8 301 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 ARPC5LQ9BPX5 153 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 UBQLN2Q9UHD9 624 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 NSG2Q9Y328 171 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 LINC00473A8K010 186 aa17.66■□□□□ 0.42
SPAST-204ENST00000621856 RAMP3O60896 148 aa17.66■□□□□ 0.42
SPAST-204ENST00000621856 CDKN1AP38936 164 aa17.66■□□□□ 0.42
SPAST-204ENST00000621856 RPL39P5Q59GN2 51 aa17.66■□□□□ 0.42
SPAST-204ENST00000621856 HEPN1Q6WQI6 88 aa17.66■□□□□ 0.42
SPAST-204ENST00000621856 ZNF439Q8NDP4 499 aa17.66■□□□□ 0.42
SPAST-204ENST00000621856 A0A1B0GU03 582 aa17.65■□□□□ 0.42
SPAST-204ENST00000621856 ATP6V1G1O75348 118 aa17.65■□□□□ 0.42
SPAST-204ENST00000621856 C1QL1O75973 258 aa17.65■□□□□ 0.42
SPAST-204ENST00000621856 IGKV1-5P01602 117 aa17.65■□□□□ 0.42
SPAST-204ENST00000621856 SLC25A6P12236 298 aa17.65■□□□□ 0.42
SPAST-204ENST00000621856 DUTP33316 252 aaKnown RBP17.65■□□□□ 0.42
SPAST-204ENST00000621856 HTR2BP41595 481 aa17.65■□□□□ 0.42
SPAST-204ENST00000621856 UBA52P62987 128 aaKnown RBP17.65■□□□□ 0.42
SPAST-204ENST00000621856 ZNF471Q9BX82 626 aaPredicted RBP17.65■□□□□ 0.42
SPAST-204ENST00000621856 FAM212BQ9NTI7 297 aaPredicted RBP17.65■□□□□ 0.42
SPAST-204ENST00000621856 TRBV23-1A0A0A0MS06 115 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 F5H0A9 414 aaPredicted RBP17.64■□□□□ 0.41
SPAST-204ENST00000621856 ATG12O94817 140 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 SPDEFO95238 335 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 LINC00205P59089 165 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 ERVFRD-1P60508 538 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 IZUMO4Q1ZYL8 232 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 CXorf66Q5JRM2 361 aaPredicted RBP17.64■□□□□ 0.41
SPAST-204ENST00000621856 LYG1Q8N1E2 194 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.64■□□□□ 0.41
SPAST-204ENST00000621856 OR8B3Q8NGG8 313 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 RAB39BQ96DA2 213 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 OR8B2Q96RD0 313 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 CHODLQ9H9P2 273 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 PLEKHA2Q9HB19 425 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 MIOXQ9UGB7 285 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 GAB2Q9UQC2 676 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 HRNRQ86YZ3 2850 aaPredicted RBP17.64■□□□□ 0.41
SPAST-204ENST00000621856 RAB29O14966 203 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 PROP1O75360 226 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 S1PR2O95136 353 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 NXPH3O95157 252 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 RNF224P0DH78 156 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 HKR1P10072 659 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 RPL12P30050 165 aaKnown RBP17.64■□□□□ 0.41
SPAST-204ENST00000621856 NCR3LG1Q68D85 454 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 OR8H3Q8N146 312 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 CACNG5Q9UF02 275 aa17.64■□□□□ 0.41
SPAST-204ENST00000621856 SMG1Q96Q15 3661 aaKnown RBP17.63■□□□□ 0.41
SPAST-204ENST00000621856 GOSR1O95249 250 aa17.63■□□□□ 0.41
SPAST-204ENST00000621856 PVALBP20472 110 aaPredicted RBP17.63■□□□□ 0.41
SPAST-204ENST00000621856 POLR2GP62487 172 aaKnown RBP eCLIP17.63■□□□□ 0.41
SPAST-204ENST00000621856 TMEM155Q4W5P6 130 aa17.63■□□□□ 0.41
SPAST-204ENST00000621856 SLC7A5P1Q8MH63 180 aa17.63■□□□□ 0.41
SPAST-204ENST00000621856 CD300LFQ8TDQ1 290 aa17.63■□□□□ 0.41
SPAST-204ENST00000621856 NEIL1Q96FI4 390 aaPredicted RBP17.63■□□□□ 0.41
SPAST-204ENST00000621856 MAGT1Q9H0U3 335 aa17.63■□□□□ 0.41
SPAST-204ENST00000621856 USF3Q68DE3 2245 aa17.63■□□□□ 0.41
SPAST-204ENST00000621856 SAA2-SAA4A0A096LPE2 208 aa17.62■□□□□ 0.41
SPAST-204ENST00000621856 WRBO00258 174 aa17.62■□□□□ 0.41
SPAST-204ENST00000621856 SAA2P0DJI9 122 aaPredicted RBP17.62■□□□□ 0.41
SPAST-204ENST00000621856 BRWD1-AS2P59051 145 aa17.62■□□□□ 0.41
SPAST-204ENST00000621856 ZNF841Q6ZN19 808 aa17.62■□□□□ 0.41
SPAST-204ENST00000621856 SLC25A48Q6ZT89 311 aaKnown RBP17.62■□□□□ 0.41
SPAST-204ENST00000621856 ST8SIA2Q92186 375 aa17.62■□□□□ 0.41
SPAST-204ENST00000621856 PRELID3BQ9Y3B1 194 aa17.62■□□□□ 0.41
SPAST-204ENST00000621856 MMP24Q9Y5R2 645 aa17.62■□□□□ 0.41
SPAST-204ENST00000621856 SSSCA1O60232 199 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 FCGR3BO75015 233 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 KRASP01116 189 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 G6PCP35575 357 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 P2RY1P47900 373 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 VAMP2P63027 116 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 ID3Q02535 119 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 Q6ZRM9 215 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 DMBX1Q8NFW5 382 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 KLF2Q9Y5W3 355 aaPredicted RBP17.61■□□□□ 0.41
SPAST-204ENST00000621856 GPR37O15354 613 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 PITX3O75364 302 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 DLX6P56179 175 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 TMEM33P57088 247 aa17.61■□□□□ 0.41
SPAST-204ENST00000621856 ALKAL2Q6UX46 152 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms