RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 GNB1P62873 340 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 MST1LQ2TV78 715 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 ZNF665Q9H7R5 613 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 HEXA-AS1Q9H8Q6 139 aa8.71□□□□□ -1.02
VPS11-208ENST00000621676 IGLV3-9A0A075B6K5 115 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 SH2D7A6NKC9 451 aaPredicted RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 K7N7A8 449 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 PROP1O75360 226 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 TMEM50AO95807 157 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 CD8AP01732 235 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 REG1AP05451 166 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 HOXD4P09016 255 aaPredicted RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 IL13RA2Q14627 380 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 SELENOHQ8IZQ5 122 aaKnown RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 SDSLQ96GA7 329 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 GAFA1Q96PS6 74 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 FBXL17Q9UF56 701 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 NPTNQ9Y639 398 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 IGKV1-39P01597 117 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 IGKV1D-39P04432 117 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 P2RX3P56373 397 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 DEFA5Q01523 94 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 CT45A1Q5HYN5 189 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 C10orf55Q5SWW7 151 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 H1FOOQ8IZA3 346 aaPredicted RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 OR4A4PQ8NGN8 299 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 CT45A3Q8NHU0 189 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 PPP1R35Q8TAP8 253 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 MED30Q96HR3 178 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 MS4A7Q9GZW8 240 aaPredicted RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 UBQLN2Q9UHD9 624 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 CEACAM18A8MTB9 384 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 MGST3O14880 152 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 ELLP55199 621 aaPredicted RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 TMEM200BQ69YZ2 307 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 ITLN2Q8WWU7 325 aaPredicted RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 TMEM222Q9H0R3 208 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 ALX4Q9H161 411 aaPredicted RBP8.7□□□□□ -1.02
VPS11-208ENST00000621676 FAM96BQ9Y3D0 163 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 SELENOKQ9Y6D0 94 aa8.7□□□□□ -1.02
VPS11-208ENST00000621676 MXRA5Q9NR99 2828 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 TMEM178BH3BS89 294 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 ST8SIA3O43173 380 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 IGLV2-14P01704 120 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 HES1Q14469 280 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 SAXO1Q8IYX7 474 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 KIR3DL3Q8N743 410 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 KDF1Q8NAX2 398 aaPredicted RBP8.69□□□□□ -1.02
VPS11-208ENST00000621676 ST8SIA2Q92186 375 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 PINX1Q96BK5 328 aaKnown RBP8.69□□□□□ -1.02
VPS11-208ENST00000621676 SLC25A32Q9H2D1 315 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 TRAV38-1A0A0B4J264 116 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 TMEM127O75204 238 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 DAOP14920 347 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 MRPS11P82912 194 aaKnown RBP8.69□□□□□ -1.02
VPS11-208ENST00000621676 COMMD7Q86VX2 200 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 ABHD12Q8N2K0 398 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 OR5C1Q8NGR4 320 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 RBPMSQ93062 196 aaKnown RBP8.69□□□□□ -1.02
VPS11-208ENST00000621676 HCFC1P51610 2035 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 ZNF705EA8MWA4 302 aaPredicted RBP8.69□□□□□ -1.02
VPS11-208ENST00000621676 PJVKQ0ZLH3 352 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 MLANAQ16655 118 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 MORN2Q502X0 79 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 ZNF585BQ52M93 769 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 SNX22Q96L94 193 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 PLEKHF2Q9H8W4 249 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 MMP26Q9NRE1 261 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 TAS2R3Q9NYW6 316 aa8.69□□□□□ -1.02
VPS11-208ENST00000621676 SAA2-SAA4A0A096LPE2 208 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 IGKV1-5P01602 117 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 SAA2P0DJI9 122 aaPredicted RBP8.68□□□□□ -1.02
VPS11-208ENST00000621676 M6PRP20645 277 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 LRRC10Q5BKY1 277 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 TMEM182Q6ZP80 229 aaPredicted RBP8.68□□□□□ -1.02
VPS11-208ENST00000621676 H2BFWTQ7Z2G1 175 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 BVESQ8NE79 360 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 ZDHHC8Q9ULC8 765 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 AKR1C3P42330 323 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 SSX2Q16385 188 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 ACOT7LQ6ZUV0 252 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 MOB3BQ86TA1 216 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 TAF15Q92804 592 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS11-208ENST00000621676 RSG1Q9BU20 258 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 RAB18Q9NP72 206 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 TNFSF18Q9UNG2 199 aa8.68□□□□□ -1.02
VPS11-208ENST00000621676 SOX21Q9Y651 276 aaPredicted RBP8.68□□□□□ -1.02
VPS11-208ENST00000621676 GPR37O15354 613 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 IFNA10P01566 189 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 IFNA7P01567 189 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 CD200P41217 278 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 LRRC46Q96FV0 321 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 RITA1Q96K30 269 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 FAM103A1Q9BTL3 118 aaKnown RBP8.67□□□□□ -1.02
VPS11-208ENST00000621676 BPESC1Q9GZL8 116 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 UNC79Q9P2D8 2635 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 NKX6-3A6NJ46 265 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 C1orf87Q8N0U7 546 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 ABHD5Q8WTS1 349 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 RSRP1Q9BUV0 290 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms