RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CLN8Q9UBY8 286 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 DOCK11Q5JSL3 2073 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 RNF212BA8MTL3 300 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 NTN3O00634 580 aaPredicted RBP16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 EREGO14944 169 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 RAMP3O60896 148 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 VENTXO95231 258 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 OR4A8P0C604 315 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 NPPCP23582 126 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 NEU1Q99519 415 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 CYB561P49447 251 aa16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 MBNL3Q9NUK0 354 aaKnown RBP16.48■□□□□ 0.23
PDLIM3-212ENST00000620787 GALR2O43603 387 aaPredicted RBP16.47■□□□□ 0.23
PDLIM3-212ENST00000620787 IGHEP01854 428 aa16.47■□□□□ 0.23
PDLIM3-212ENST00000620787 G6PCP35575 357 aa16.47■□□□□ 0.23
PDLIM3-212ENST00000620787 CLDN18P56856 261 aa16.47■□□□□ 0.23
PDLIM3-212ENST00000620787 NPCDR1Q9BY65 106 aa16.47■□□□□ 0.23
PDLIM3-212ENST00000620787 PLA2G3Q9NZ20 509 aa16.47■□□□□ 0.23
PDLIM3-212ENST00000620787 C1QTNF9BB2RNN3 333 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 CELA3AP09093 270 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 COX5AP20674 150 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 CCKARP32238 428 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 PMP22Q01453 160 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 TRA2AQ13595 282 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 WDR86Q86TI4 376 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 GBGT1Q8N5D6 347 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 C5orf30Q96GV9 206 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 RYDENQ9NUL5 291 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 WIPI2Q9Y4P8 454 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 FREM2Q5SZK8 3169 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 ODAMA1E959 279 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 LRRC30A6NM36 301 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 MLNRO43193 412 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 KRASP01116 189 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 NUTF2P61970 127 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 PLP2Q04941 152 aa16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 MRPL41Q8IXM3 137 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-212ENST00000620787 DOCK7Q96N67 2140 aa16.46■□□□□ 0.22
PDLIM3-212ENST00000620787 IFNL4K9M1U5 179 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 TCAPO15273 167 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 SYNGR4O95473 234 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 DEFA4P12838 97 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 IL3RAP26951 378 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 CHRNA7P36544 502 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 CNN1P51911 297 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 RPL15P61313 204 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 RPL30P62888 115 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 PAX5Q02548 391 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 MSMO1Q15800 293 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 SPINK14Q6IE38 97 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 BOKQ9UMX3 212 aaPredicted RBP16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 USF3Q68DE3 2245 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 ERVK11-1P61568 191 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 LCN2P80188 198 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 VWC2Q2TAL6 325 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 KCNIP4Q6PIL6 250 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 ZNF645Q8N7E2 425 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 OR5T1Q8NG75 326 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 OR10P1Q8NGE3 313 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 OR1L1Q8NH94 360 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 APH1AQ96BI3 265 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 MRPL37Q9BZE1 423 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 R4GN57 208 aa16.45■□□□□ 0.22
PDLIM3-212ENST00000620787 C11orf94C9JXX5 98 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 ZG16O60844 167 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 RAB4BP61018 213 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 RPS16P62249 146 aaKnown RBP16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 ZNF816Q0VGE8 651 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 EIF4EBP1Q13541 118 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 IQCJQ1A5X6 159 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 SPATA46Q5T0L3 261 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 WFIKKN1Q96NZ8 548 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 ZNF703Q9H7S9 590 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 PILRBQ9UKJ0 227 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 WASF3Q9UPY6 502 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 FAM78BQ5VT40 261 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 TEX38Q6PEX7 206 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 LINC01551Q86U37 167 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 SCCPDHQ8NBX0 429 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 DTD1Q8TEA8 209 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 ZDHHC16Q969W1 377 aa16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-212ENST00000620787 FRYLO94915 3013 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 S1PR2O95136 353 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 MT-CO3P00414 261 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 MPLP40238 635 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 TMEM144Q7Z5S9 345 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 OR2D2Q9H210 308 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 GTF3C1Q12789 2109 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 BRWD1-AS2P59051 145 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 RTL8AQ9BWD3 113 aa16.43■□□□□ 0.22
PDLIM3-212ENST00000620787 SERPINA7P05543 415 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 CDC34P49427 236 aaPredicted RBP16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 GNB1P62873 340 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 FAM53AQ6NSI3 398 aaPredicted RBP16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 Q8IYB0 196 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 ZBTB34Q8NCN2 500 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 OR2M7Q8NG81 312 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 CD99P14209 185 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 NUFIP2Q7Z417 695 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms