RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ARG1P05089 322 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 OR4E1P0C645 316 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 VSIG10L2P0DP72 767 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 HOXB4P17483 251 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 AKR1C4P17516 323 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 IL3RAP26951 378 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF137PP52743 207 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 EIF4EBP1Q13541 118 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 HLA-DRB5Q30154 266 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 PHLDA2Q53GA4 152 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 ARSJQ5FYB0 599 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF626Q68DY1 528 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 C11orf88Q6PI97 169 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF66Q6ZN08 573 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 C1orf229Q6ZS94 237 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 KCTD9Q7L273 389 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 SGPP2Q8IWX5 399 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 OR4P4Q8NGL7 312 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 OR10X1Q8NGY0 326 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 RTN4IP1Q8WWV3 396 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 LHX4Q969G2 390 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 TMEM230Q96A57 120 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 C5orf30Q96GV9 206 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 S1PR3Q99500 378 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 HSD17B10Q99714 261 aaKnown RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 BEX2Q9BXY8 128 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 BEX1Q9HBH7 125 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 SLC2A9Q9NRM0 540 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 ZNRD1Q9P1U0 126 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 DPM3Q9P2X0 92 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 KCNS2Q9ULS6 477 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 KCNIP3Q9Y2W7 256 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 ANKRD17O75179 2603 aaKnown RBP6.52□□□□□ -1.37
CPNE3-209ENST00000620393 CCDC168Q8NDH2 2452 aa6.52□□□□□ -1.37
CPNE3-209ENST00000620393 VPS13CQ709C8 3753 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 SAA2-SAA4A0A096LPE2 208 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 TEX13DA0A0J9YY54 714 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 C9orf170A2RU37 121 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 CRYM-AS1A6NIL9 109 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 SNRPGP15A8MWD9 76 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 LEUTXA8MZ59 168 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 M0R1X1 148 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 TNFSF12O43508 249 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 SFT2D2O95562 160 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 SAA2P0DJI9 122 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 HTR1DP28221 377 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 DUTP33316 252 aaKnown RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 LGALS4P56470 323 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 SUPT4H1P63272 117 aaKnown RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 KLRD1Q13241 179 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 PPP1R1AQ13522 171 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 C4orf46Q504U0 113 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 RPL39P5Q59GN2 51 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 MINOS1Q5TGZ0 78 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 FAM71F2Q6NXP2 309 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 GLDNQ6ZMI3 551 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 ZNF833PQ6ZTB9 187 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 TBC1D26Q86UD7 250 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 PDZD9Q8IXQ8 264 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 CAPSLQ8WWF8 208 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 GALNT14Q96FL9 552 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 ADTRPQ96IZ2 230 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 NAA60Q9H7X0 242 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 GPN1Q9HCN4 374 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 AMMECR1Q9Y4X0 333 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 MINOS1-NBL1R4GNA1 71 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 ARHGAP32A7KAX9 2087 aa6.51□□□□□ -1.37
CPNE3-209ENST00000620393 ASH1LQ9NR48 2969 aaKnown RBP6.51□□□□□ -1.37
CPNE3-209ENST00000620393 FLNBO75369 2602 aaKnown RBP6.5□□□□□ -1.37
CPNE3-209ENST00000620393 DOCK11Q5JSL3 2073 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 A0A0A6YYJ9 748 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 IGHV1-69DA0A0B4J2H0 117 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 C3orf85A0A1B0GTC6 90 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 A0A1W2PRD5 423 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 A0A1W2PRF3 423 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 A0A1W2PRM7 423 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 C7orf66A4D0T2 115 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 RNF212BA8MTL3 300 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 NPFFO15130 113 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 CD5LO43866 347 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 B3GALNT1O75752 331 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 IGHV1-69P01742 117 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 GAPDHP04406 335 aaKnown RBP6.5□□□□□ -1.37
CPNE3-209ENST00000620393 CT45A6P0DMU7 189 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 CT45A5P0DMU8 189 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 CT45A7P0DMV0 189 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 EPHA1P21709 976 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 F2RP25116 425 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 CEACAM3P40198 252 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 THBS3P49746 956 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 LINC00205P59089 165 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 BPIFB3P59826 476 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 RPL30P62888 115 aaKnown RBP6.5□□□□□ -1.37
CPNE3-209ENST00000620393 DHRS2Q13268 280 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 DIAPH2-AS1Q14236 149 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 TATDN3Q17R31 274 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 SP6Q3SY56 376 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 MIDNQ504T8 468 aa6.5□□□□□ -1.37
CPNE3-209ENST00000620393 LDLRAD2Q5SZI1 272 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms