RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 OR2D2Q9H210 308 aa17.16■□□□□ 0.34
NEK3-208ENST00000618534 COL27A1Q8IZC6 1860 aaPredicted RBP17.15■□□□□ 0.34
NEK3-208ENST00000618534 FGF7P21781 194 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 TFF3Q07654 80 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 P2RY6Q15077 328 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 PEAR1Q5VY43 1037 aaPredicted RBP17.15■□□□□ 0.34
NEK3-208ENST00000618534 Q8IYB0 196 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 SMOC1Q9H4F8 434 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 POLDIP2Q9Y2S7 368 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 FRYQ5TBA9 3013 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 A0A087X0M5 115 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 A0A1B0GX30 115 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 ODAMA1E959 279 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 P0C879 139 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 FFAR4Q5NUL3 377 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 LINC00696Q6ZRV3 163 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 ZNF645Q8N7E2 425 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 BCL2L2Q92843 193 aaPredicted RBP17.15■□□□□ 0.34
NEK3-208ENST00000618534 OR5B12Q96R08 314 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 PCGF1Q9BSM1 259 aa17.15■□□□□ 0.34
NEK3-208ENST00000618534 PPP5D1E7EU14 171 aa17.14■□□□□ 0.33
NEK3-208ENST00000618534 S1PR2O95136 353 aa17.14■□□□□ 0.33
NEK3-208ENST00000618534 PDGFBP01127 241 aaPredicted RBP17.14■□□□□ 0.33
NEK3-208ENST00000618534 TDGF1P13385 188 aa17.14■□□□□ 0.33
NEK3-208ENST00000618534 SELEP16581 610 aa17.14■□□□□ 0.33
NEK3-208ENST00000618534 ZNF146Q15072 292 aa17.14■□□□□ 0.33
NEK3-208ENST00000618534 TGIF2LYQ8IUE0 185 aa17.14■□□□□ 0.33
NEK3-208ENST00000618534 AHCTF1Q8WYP5 2266 aa17.14■□□□□ 0.33
NEK3-208ENST00000618534 XKRY2A2RUG3 117 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 LRRC30A6NM36 301 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 PMS2P5A8MQ11 134 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 SH2D1BO14796 132 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 CELA3BP08861 270 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 OR3A1P47881 315 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 JOSD1Q15040 202 aaPredicted RBP17.13■□□□□ 0.33
NEK3-208ENST00000618534 MSMO1Q15800 293 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 ALKBH6Q3KRA9 238 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 ZDHHC16Q969W1 377 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 WDYHV1Q96HA8 205 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 OR2J1Q9GZK6 312 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 A0A1B0GV90 55 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 A0A1W2PPQ1 181 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 DVL1O14640 695 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 ZG16O60844 167 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 GZMBP10144 247 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 DEFA4P12838 97 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 PMP22Q01453 160 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 GTF3C1Q12789 2109 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 DOCK11Q5JSL3 2073 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 USF3Q68DE3 2245 aa17.13■□□□□ 0.33
NEK3-208ENST00000618534 PSPNO60542 156 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 HRASP01112 189 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 ATP6V1FQ16864 119 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 ZNF66Q6ZN08 573 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 OR52L2PQ8NGH6 319 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 MANBALQ9NQG1 85 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 IFNA10P01566 189 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 GYPAP02724 150 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 SSX9Q7RTT3 188 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 RNASEH2CQ8TDP1 164 aaKnown RBP17.12■□□□□ 0.33
NEK3-208ENST00000618534 NANOS1Q8WY41 292 aaKnown RBP17.12■□□□□ 0.33
NEK3-208ENST00000618534 RAB24Q969Q5 203 aa17.12■□□□□ 0.33
NEK3-208ENST00000618534 C12orf77C9JDV5 145 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 PAGE4O60829 102 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 HAND1O96004 215 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 MBP02144 154 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 GRPP07492 148 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 BRWD1-AS2P59051 145 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 TBC1D28Q2M2D7 210 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 SPINK9Q5DT21 86 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 OR10P1Q8NGE3 313 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 DTD1Q8TEA8 209 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 NPCDR1Q9BY65 106 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 ACTR3CQ9C0K3 210 aaPredicted RBP17.11■□□□□ 0.33
NEK3-208ENST00000618534 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.11■□□□□ 0.33
NEK3-208ENST00000618534 KCNIP1Q9NZI2 227 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 C17orf98A8MV24 154 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 SMPD2O60906 423 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 RAC2P15153 192 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 PPP1CBP62140 327 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 HOXA4Q00056 320 aaPredicted RBP17.11■□□□□ 0.33
NEK3-208ENST00000618534 EIF4EBP1Q13541 118 aaPredicted RBP17.11■□□□□ 0.33
NEK3-208ENST00000618534 COA6Q5JTJ3 125 aaKnown RBP17.11■□□□□ 0.33
NEK3-208ENST00000618534 BTNL3Q6UXE8 466 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 GALMQ96C23 342 aa17.11■□□□□ 0.33
NEK3-208ENST00000618534 PAX1P15863 534 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 COX5AP20674 150 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 FBXW9Q5XUX1 488 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 TMEM30CPA0ZSE6 113 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 ACP1P24666 158 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 FAM3BP58499 235 aaPredicted RBP17.1■□□□□ 0.33
NEK3-208ENST00000618534 ZBTB34Q8NCN2 500 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 TMEM170AQ8WVE7 144 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 FOXJ2Q9P0K8 574 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 ABI3Q9P2A4 366 aa17.1■□□□□ 0.33
NEK3-208ENST00000618534 C9orf172C9J069 976 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 IDH3GP51553 393 aaPredicted RBP17.09■□□□□ 0.33
NEK3-208ENST00000618534 NEIL1Q96FI4 390 aaPredicted RBP17.09■□□□□ 0.33
NEK3-208ENST00000618534 IER2Q9BTL4 223 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 FUT9Q9Y231 359 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms