RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CBX1P83916 185 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 EXOSC2Q13868 293 aaKnown RBP3.37□□□□□ -1.87
SNCA-213ENST00000618500 PVRIGQ6DKI7 326 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 DMKNQ6E0U4 476 aaPredicted RBP3.37□□□□□ -1.87
SNCA-213ENST00000618500 SSX6Q7RTT6 188 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 SYS1Q8N2H4 156 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 MAPKAPK5-AS1Q8N8E1 139 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 RNF141Q8WVD5 230 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 FGGYQ96C11 551 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 METTL9Q9H1A3 318 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 C5orf66Q9H5L9 145 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 MGAT4AQ9UM21 535 aa3.37□□□□□ -1.87
SNCA-213ENST00000618500 SORL1Q92673 2214 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 A0A1W2PQL4 384 aaPredicted RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 ERICH4A6NGS2 130 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 TMEM212A6NML5 194 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 OR4C45A6NMZ5 311 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 TSPAN4O14817 238 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 CREBL2O60519 120 aaPredicted RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 IGLV2-23P01705 113 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 IGHV3-11P01762 117 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 OR9G9P0C7N8 305 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 CPEP16870 476 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 ZNF85Q03923 595 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 RNF212Q495C1 297 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 SOHLH1Q5JUK2 328 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 NECAP1Q8NC96 275 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 OR13C3Q8NGS6 347 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 OR52N1Q8NH53 320 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 C6orf62Q9GZU0 229 aaPredicted RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 RIBC2Q9H4K1 309 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 MAP6D1Q9H9H5 199 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 MRPL27Q9P0M9 148 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.36□□□□□ -1.87
SNCA-213ENST00000618500 ZNF257Q9Y2Q1 563 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 A0A1W2PPE3 182 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 TMEM213A2RRL7 107 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 NPIPB5A8MRT5 1133 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 SLC16A6O15403 523 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 PRKYO43930 277 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 MRPL3P09001 348 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 TMEM225BP0DP42 221 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 ATP6V1B2P21281 511 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 CBLN1P23435 193 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 MRGPRG-AS1Q2M3A8 158 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 MORN3Q6PF18 240 aaPredicted RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 TEX45Q8NA69 505 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 OR52B4Q8NGK2 314 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 THRSPQ92748 146 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 OR14A2Q96R54 314 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 FBXL15Q9H469 300 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 FGFR1OP2Q9NVK5 253 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 GNG12Q9UBI6 72 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 METTL1Q9UBP6 276 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 MLXQ9UH92 298 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 EXOGQ9Y2C4 368 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 RPL36Q9Y3U8 105 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 HIST1H1BP16401 226 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 RAB3AP20336 220 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 OR3A3P47888 321 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 ATP5G2Q06055 141 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 FXYD3Q14802 87 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 RSU1Q15404 277 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 PIGYQ3MUY2 71 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 ZNF367Q7RTV3 350 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 BCDIN3DQ7Z5W3 292 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 LFNGQ8NES3 379 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 RFESDQ8TAC1 157 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 MRPL30Q8TCC3 161 aaKnown RBP3.36□□□□□ -1.87
SNCA-213ENST00000618500 RFKQ969G6 155 aa3.36□□□□□ -1.87
SNCA-213ENST00000618500 AQP12BA6NM10 295 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 FCN1O00602 326 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 SLC2A2P11168 524 aaPredicted RBP3.35□□□□□ -1.87
SNCA-213ENST00000618500 IGFBP3P17936 291 aaPredicted RBP3.35□□□□□ -1.87
SNCA-213ENST00000618500 MAS1LP35410 378 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 SCN1BQ07699 218 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 AQP12AQ8IXF9 295 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 OR1L6Q8NGR2 347 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 OTULINQ96BN8 352 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 SRSF8Q9BRL6 282 aaKnown RBP3.35□□□□□ -1.87
SNCA-213ENST00000618500 GABARAPL3Q9BY60 117 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 WFDC10AQ9H1F0 79 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 KCNIP1Q9NZI2 227 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 GHRLQ9UBU3 117 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 GTF2A1LQ9UNN4 478 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 UFC1Q9Y3C8 167 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 V9GYQ6 96 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 A6NIN4 97 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 MCRIP1C9JLW8 97 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 K7EMT4 169 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 DYNC1I1O14576 645 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 TRBV12-3P01733 135 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 CD5P06127 495 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 CRYGCP07315 174 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 HTR1AP08908 422 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 MIFP14174 115 aa3.35□□□□□ -1.87
SNCA-213ENST00000618500 MYOD1P15172 320 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms