RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CRYGSP22914 178 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 SPINK9Q5DT21 86 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 DHRS7BQ6IAN0 325 aaPredicted RBP11.85□□□□□ -0.51
CIITA-213ENST00000618327 PIP4P1Q86T03 277 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 WBP1Q96G27 269 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 MARS2Q96GW9 593 aaKnown RBP11.85□□□□□ -0.51
CIITA-213ENST00000618327 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 Q9N2K0 584 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 SLC2A8Q9NY64 477 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 A0A1W2PRD5 423 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 A0A1W2PRF3 423 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 A0A1W2PRM7 423 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 MED19A0JLT2 244 aaPredicted RBP11.85□□□□□ -0.51
CIITA-213ENST00000618327 LINC00862A6NCI5 91 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
CIITA-213ENST00000618327 TMEM33P57088 247 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 SLC38A11Q08AI6 406 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 ODAMA1E959 279 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 OPN1MWP04001 364 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 OPN1MW2P0DN77 364 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 OPN1MW3P0DN78 364 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 NBL1P41271 181 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 AMTP48728 403 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 FOXF2Q12947 444 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 OVCH2Q7RTZ1 564 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 PRSS33Q8NF86 280 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 IGKV1-9A0A0C4DH69 117 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 FCN1O00602 326 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 CHRNA7P36544 502 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 SMUG1Q53HV7 270 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 TGIF2LYQ8IUE0 185 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 MOB3AQ96BX8 217 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 A0A1W2PPE3 182 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 CHST1O43916 411 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 SPINK4O60575 86 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 RHBDL1O75783 438 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
CIITA-213ENST00000618327 OR1L1Q8NH94 360 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 HEXA-AS1Q9H8Q6 139 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
CIITA-213ENST00000618327 TEX50A0A1B0GTY4 177 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 C7orf77A4D0Y5 90 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 CDRT15L2A8MXV6 281 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 IFNL4K9M1U5 179 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 COX7A2P2O60397 106 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 MELTFP08582 738 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 OR5I1Q13606 314 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 GNB4Q9HAV0 340 aa11.84□□□□□ -0.51
CIITA-213ENST00000618327 PHF3Q92576 2039 aaKnown RBP11.83□□□□□ -0.51
CIITA-213ENST00000618327 CACNA1BQ00975 2339 aa11.83□□□□□ -0.51
CIITA-213ENST00000618327 CIDEAO60543 219 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 DAOP14920 347 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 P2RY1P47900 373 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 RNASEKQ6P5S7 137 aaKnown RBP11.83□□□□□ -0.52
CIITA-213ENST00000618327 ETV3LQ6ZN32 361 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 CHAC2Q8WUX2 184 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 ZNF714Q96N38 554 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 ASCL3Q9NQ33 180 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 DIDO1Q9BTC0 2240 aaKnown RBP11.83□□□□□ -0.52
CIITA-213ENST00000618327 POLEQ07864 2286 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 TMEM50BP56557 158 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 DTX1Q86Y01 620 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 MUC15Q8N387 334 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 GCSAMQ8N6F7 178 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 MYO7BQ6PIF6 2116 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 WNT9BO14905 357 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
CIITA-213ENST00000618327 DCAF12L2Q5VW00 463 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 Q6ZS92 163 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 ZNF524Q96C55 264 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 MEGF10Q96KG7 1140 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 PROK2Q9HC23 129 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 MPDZO75970 2070 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 A0A1B0GU03 582 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 DUXBA0A1W2PPF3 345 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 B9A039 149 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 NDUFA2O43678 99 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 CRYBA1P05813 215 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 G6PCP35575 357 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 BSPH1Q075Z2 132 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 Q1RN00 199 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 BSXQ3C1V8 233 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 OR2T10Q8NGZ9 312 aa11.83□□□□□ -0.52
CIITA-213ENST00000618327 SNRNP40Q96DI7 357 aaKnown RBP11.83□□□□□ -0.52
CIITA-213ENST00000618327 NEIL1Q96FI4 390 aaPredicted RBP11.83□□□□□ -0.52
CIITA-213ENST00000618327 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
CIITA-213ENST00000618327 ATRXP46100 2492 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 RAB29O14966 203 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 WISP1O95388 367 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 NHLH1Q02575 133 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 NHLH2Q02577 135 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 C21orf62-AS1Q17RA5 79 aa11.82□□□□□ -0.52
CIITA-213ENST00000618327 FAM209AQ5JX71 171 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms