RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CLEC12BQ2HXU8 276 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 COA6Q5JTJ3 125 aaKnown RBP9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 NECAP1Q8NC96 275 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 SRD5A3Q9H8P0 318 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 NECAP2Q9NVZ3 263 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 ACACAQ13085 2346 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 HS3ST1O14792 307 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 CEACAM4O75871 244 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 DTYMKP23919 212 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 ATP6V0CP27449 155 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 FGF12P61328 243 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 C20orf204Q6ZNR8 217 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 OR5L1Q8NGL2 311 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 RDH5Q92781 318 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 TECTBQ96PL2 329 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 FZR1Q9UM11 496 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 LAMP3Q9UQV4 416 aa9.66□□□□□ -0.86
PCDHGA9-202ENST00000616887 TRAV39A0A0B4J263 110 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 ANKRD30BLA7E2S9 258 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 OPN1MWP04001 364 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 IL6RP08887 468 aaPredicted RBP9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 SCTP09683 121 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 OPN1MW2P0DN77 364 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 OPN1MW3P0DN78 364 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 HNF1AP20823 631 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 HOXC12P31275 282 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 UBE2NP61088 152 aaKnown RBP9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 GUSBP1Q15486 140 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 GPR157Q5UAW9 335 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 RTL6Q6ICC9 239 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 SSX7Q7RTT5 188 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 GAL3ST2Q9H3Q3 398 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 TMEM242Q9NWH2 141 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 NAGKQ9UJ70 344 aa9.65□□□□□ -0.86
PCDHGA9-202ENST00000616887 CADP27708 2225 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 TRAPPC2LH3BP13 241 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 ITGB1BP1O14713 200 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 AADACP22760 399 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 GNB2P62879 340 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 GABRA6Q16445 453 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 PRSS8Q16651 343 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 TBC1D28Q2M2D7 210 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 CLDND2Q8NHS1 167 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 NANOS1Q8WY41 292 aaKnown RBP9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 TBX15Q96SF7 602 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 ZNF286AQ9HBT8 521 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 DKK4Q9UBT3 224 aa9.65□□□□□ -0.87
PCDHGA9-202ENST00000616887 GTF3C1Q12789 2109 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 CRYM-AS1A6NIL9 109 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 ZNF728P0DKX0 622 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 CEACAM8P31997 349 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 CCKARP32238 428 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 MPV17P39210 176 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 SEM1Q6ZVN7 128 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 CXorf67Q86X51 503 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 OR5A2Q8NGI9 324 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 UBALD1Q8TB05 177 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 SLC25A40Q8TBP6 338 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 SLC2A9Q9NRM0 540 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 ZFP30Q9Y2G7 519 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 A0A1W2PPQ1 181 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 AQP7O14520 342 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 KLK10O43240 276 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 CTSDP07339 412 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 OMGP23515 440 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 OR10J1P30954 320 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 UCP3P55916 312 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 PPP1CBP62140 327 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 ACSF3Q4G176 576 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 FAM90A2PQ658T7 463 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 Q6ZT83 130 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 Q8NFD4 153 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 RTN4IP1Q8WWV3 396 aaPredicted RBP9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 DECR2Q9NUI1 292 aa9.64□□□□□ -0.87
PCDHGA9-202ENST00000616887 IGKV1-6A0A0C4DH72 117 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 TFF1P04155 84 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 C1QTNF9P0C862 333 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 PDLIM4P50479 330 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 RAB7AP51149 207 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 RNF151Q2KHN1 245 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 TDRG1Q3Y452 100 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 OR52M1Q8NGK5 317 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 SDSLQ96GA7 329 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 ACY3Q96HD9 319 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 GNG13Q9P2W3 67 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 FUT9Q9Y231 359 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 CHD8Q9HCK8 2581 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 TRAV24A0A0B4J272 114 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 C20orf202A1L168 122 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 CDIPTO14735 213 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 CD33P20138 364 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 GZMHP20718 246 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 CDKN1BP46527 198 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 CEBPDP49716 269 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 GNG3P63215 75 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 EWSR1Q01844 656 aaKnown RBP eCLIP9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 PSG7Q13046 419 aa9.63□□□□□ -0.87
PCDHGA9-202ENST00000616887 LYZL2Q7Z4W2 148 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms