RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ZNF66Q6ZN08 573 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 H1FOOQ8IZA3 346 aaPredicted RBP11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 DCTN5Q9BTE1 182 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNF318Q5VUA4 2279 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 EIF3GO75821 320 aaKnown RBP eCLIP11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 TFF1P04155 84 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 OR4A8P0C604 315 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 TMEM41BQ5BJD5 291 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 DNM1P46Q6ZS02 220 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 SSMEM1Q8WWF3 244 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 ABHD17AQ96GS6 310 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 OR4C12Q96R67 309 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 RBKSQ9H477 322 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNF355PQ9NSJ1 428 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 SLC25A10Q9UBX3 287 aaPredicted RBP11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 F6UZH7 168 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 HPRT1P00492 218 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 REG1BP48304 166 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 C15orf54Q8N8G6 183 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 RHOVQ96L33 236 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 CALYQ9NYX4 217 aa11.17□□□□□ -0.62
PPP4R3B-206ENST00000616407 DANCRP0C864 163 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 RND3P61587 244 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 TMEM56Q96MV1 263 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 KIAA1456Q9P272 454 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 PCNX3Q9H6A9 2034 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 RAB29O14966 203 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 CSRP1P21291 193 aaKnown RBP11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 TMEM241Q24JQ0 296 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 DIDO1Q9BTC0 2240 aaKnown RBP11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 TRBV6-7A0A0A0MS04 114 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNF705GA8MUZ8 300 aaPredicted RBP11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 THBS3P49746 956 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 ONECUT1Q9UBC0 465 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 H3BQ15 152 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 CLDN34H7C241 214 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 CCL21O00585 134 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 KIR2DL2P43627 348 aaPredicted RBP11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 SNRPEP62304 92 aaKnown RBP11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 PLA2G2CQ5R387 149 aa11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 LSM10Q969L4 123 aaKnown RBP11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
PPP4R3B-206ENST00000616407 WIPF3A6NGB9 483 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 OR13A1Q8NGR1 328 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 MEGF10Q96KG7 1140 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZDHHC11Q9H8X9 412 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 NIT2Q9NQR4 276 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 DOCK10Q96BY6 2186 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 CRYBA1P05813 215 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 TDGF1P13385 188 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 OPRK1P41145 380 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 RPEQ96AT9 228 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 C18orf12Q96KH6 178 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 PATZ1Q9HBE1 687 aaKnown RBP11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 FKBP11Q9NYL4 201 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 MARCH11A6NNE9 402 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZG16O60844 167 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 CT45A6P0DMU7 189 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 CT45A5P0DMU8 189 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 CT45A7P0DMV0 189 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 RAB13P51153 203 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 SERF2P84101 59 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 CT45A1Q5HYN5 189 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 ATRAIDQ6UW56 229 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 LDLRAD3Q86YD5 345 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 CYB561D1Q8N8Q1 229 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 CT45A3Q8NHU0 189 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 ZNF251Q9BRH9 671 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 VAX2Q9UIW0 290 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
PPP4R3B-206ENST00000616407 RPS2P15880 293 aaKnown RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 DLK1P80370 383 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 HARBI1Q96MB7 349 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZDHHC8Q9ULC8 765 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 BRCA2P51587 3418 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 IFNL4K9M1U5 179 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 NPY1RP25929 384 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 TIGITQ495A1 244 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 TCTEX1D1Q8N7M0 179 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 MRGPRGQ86SM5 289 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 VKORC1L1Q8N0U8 176 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 LILRB1Q8NHL6 650 aaPredicted RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 GTF3AQ92664 365 aaKnown RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 TAF15Q92804 592 aaKnown RBP eCLIP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 NEIL1Q96FI4 390 aaPredicted RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 BTF3L4Q96K17 158 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 RARRES2Q99969 163 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 ZNF705FA8MVS1 300 aaPredicted RBP11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 C10orf142B7Z368 130 aa11.14□□□□□ -0.63
PPP4R3B-206ENST00000616407 J3QR06 171 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms