RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 MOB3BQ86TA1 216 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 FAAP24Q9BTP7 215 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 KCNIP1Q9NZI2 227 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 ZMAT5Q9UDW3 170 aaKnown RBP14.9□□□□□ -0.02
CDX1-202ENST00000616154 HSF4Q9ULV5 492 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 LINC01548A6NM66 108 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 AP4M1O00189 453 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 SOCS1O15524 211 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 RGS5O15539 181 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 XRCC3O43542 346 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 LANCL1O43813 399 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 YPEL1O60688 119 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 BLVRBP30043 206 aaPredicted RBP14.89□□□□□ -0.03
CDX1-202ENST00000616154 GPR12P47775 334 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 REG1BP48304 166 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 VEGFCP49767 419 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 TEX38Q6PEX7 206 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 MOB1BQ7L9L4 216 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 CCDC190Q86UF4 302 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 OR10R2Q8NGX6 335 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 OR2T10Q8NGZ9 312 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 S100A16Q96FQ6 103 aaKnown RBP14.89□□□□□ -0.03
CDX1-202ENST00000616154 YPEL2Q96QA6 119 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 ATG5Q9H1Y0 275 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 RIMS4Q9H426 269 aaPredicted RBP14.89□□□□□ -0.03
CDX1-202ENST00000616154 OR2S2Q9NQN1 319 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 LIN7CQ9NUP9 197 aaKnown RBP14.89□□□□□ -0.03
CDX1-202ENST00000616154 ADAM30Q9UKF2 790 aa14.89□□□□□ -0.03
CDX1-202ENST00000616154 DGCR2P98153 550 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 PLAC9Q5JTB6 97 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 CNIH2Q6PI25 160 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 PRR18Q8N4B5 295 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 Q8N9W7 124 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 OR10V1Q8NGI7 309 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 RAX2Q96IS3 184 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 WWC2-AS2Q96NR7 200 aa14.88□□□□□ -0.03
CDX1-202ENST00000616154 RYR3Q15413 4870 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 IGHV3-72A0A0B4J1Y9 119 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 NCBP2LA6PVI3 153 aaKnown RBP14.87□□□□□ -0.03
CDX1-202ENST00000616154 MFNGO00587 321 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 S100A5P33763 92 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 GNMTQ14749 295 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 PNLIPRP3Q17RR3 467 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 ODF3L1Q8IXM7 274 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 OR8H1Q8NGG4 311 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 GALMQ96C23 342 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 DUX3Q96PT4 197 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 ABHD14AQ9BUJ0 271 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 GON7Q9BXV9 100 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 DIABLOQ9NR28 239 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 PLSCR3Q9NRY6 295 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 PLEKHJ1Q9NW61 149 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 KCNK7Q9Y2U2 307 aa14.87□□□□□ -0.03
CDX1-202ENST00000616154 CCL24O00175 119 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 RPLP1P05386 114 aaKnown RBP14.86□□□□□ -0.03
CDX1-202ENST00000616154 HIST1H1DP16402 221 aaKnown RBP14.86□□□□□ -0.03
CDX1-202ENST00000616154 ZNF260Q3ZCT1 412 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 RNF152Q8N8N0 203 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 OR52L2PQ8NGH6 319 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 RAB3CQ96E17 227 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 ARHGAP5-AS1Q96IT6 56 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 RABL2AQ9UBK7 228 aaPredicted RBP14.86□□□□□ -0.03
CDX1-202ENST00000616154 EXTL2Q9UBQ6 330 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 RABL2BQ9UNT1 228 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 V9GYH0 126 aa14.86□□□□□ -0.03
CDX1-202ENST00000616154 ITGB1BP1O14713 200 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 RAMP3O60896 148 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 RGS11O94810 467 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 MOSP00540 346 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 HLA-DQB1P01920 261 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 GSTP1P09211 210 aaKnown RBP14.85□□□□□ -0.03
CDX1-202ENST00000616154 PPP1CCP36873 323 aaKnown RBP14.85□□□□□ -0.03
CDX1-202ENST00000616154 LSAMPQ13449 338 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 FOXE3Q13461 319 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 ARL6IP1Q15041 203 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 CXorf66Q5JRM2 361 aaPredicted RBP14.85□□□□□ -0.03
CDX1-202ENST00000616154 FAM71F2Q6NXP2 309 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 C5orf24Q7Z6I8 188 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 OR8U1Q8NH10 309 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 DIRAS2Q96HU8 199 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 S1PR3Q99500 378 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 PECRQ9BY49 303 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 AKIP1Q9NQ31 210 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 MGAT4AQ9UM21 535 aa14.85□□□□□ -0.03
CDX1-202ENST00000616154 FAM25AB3EWG3 89 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 FAM25CB3EWG5 89 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 FAM25GB3EWG6 89 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 ELANEP08246 267 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 PTBP1P26599 531 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDX1-202ENST00000616154 CDX1P47902 265 aaPredicted RBP14.84□□□□□ -0.03
CDX1-202ENST00000616154 RAB25P57735 213 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 TAS2R20P59543 309 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 KIR2DS1Q14954 304 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 TMEM69Q5SWH9 247 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 ZNF833PQ6ZTB9 187 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 MFSD4AQ8N468 514 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 RASL11BQ9BPW5 248 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 IFI27L2Q9H2X8 130 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 AUNIPQ9H7T9 357 aa14.84□□□□□ -0.03
CDX1-202ENST00000616154 C12orf4Q9NQ89 552 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms