RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MED12LQ86YW9 2145 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 LILRA1O75019 489 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 G6PCP35575 357 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 CDKN1AP38936 164 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 KIAA1644Q3SXP7 199 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 KCNIP4Q6PIL6 250 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 MRPL21Q7Z2W9 205 aaKnown RBP11.19□□□□□ -0.62
MSH6-214ENST00000616033 ZNF573Q86YE8 665 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 STPG4Q8N801 248 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ABHD3Q8WU67 409 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ZDHHC16Q969W1 377 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 PRDM6Q9NQX0 595 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
MSH6-214ENST00000616033 OR6C3Q9NZP0 311 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ASPMQ8IZT6 3477 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 SYNGR3O43761 229 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 IGLV3-1P01715 115 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ZIC4Q8N9L1 334 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ZNF596Q8TC21 504 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 CLUHP3Q96NS8 147 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 VAMP8Q9BV40 100 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 WDR61Q9GZS3 305 aaKnown RBP11.19□□□□□ -0.62
MSH6-214ENST00000616033 ZNF703Q9H7S9 590 aaPredicted RBP11.19□□□□□ -0.62
MSH6-214ENST00000616033 MTCH1Q9NZJ7 389 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ABCA1O95477 2261 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 J3QW42 95 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 IGHV3-13P01766 116 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 IGHV3-7P01780 117 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 KCNMB1Q16558 191 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 COL5A1-AS1Q5SY13 56 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 FAM27BQ5VT28 67 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 ROS1P08922 2347 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 CEP250Q9BV73 2442 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 SLC17A3O00476 420 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 NGFP01138 241 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 PPP1CBP62140 327 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 UBE2ZQ9H832 354 aaPredicted RBP11.18□□□□□ -0.62
MSH6-214ENST00000616033 F2Z2F3 143 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 IGKV1-39P01597 117 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 IGKV1D-39P04432 117 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 CCR5P51681 352 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 Q6ZN92 141 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 GBGT1Q8N5D6 347 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 ZNF114Q8NC26 417 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 OR5D13Q8NGL4 314 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 TMEM242Q9NWH2 141 aa11.18□□□□□ -0.62
MSH6-214ENST00000616033 IGKV1-5P01602 117 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 FRMD6-AS1P0C7T7 363 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 CTSSP25774 331 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 ADMP35318 185 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 CDC34P49427 236 aaPredicted RBP11.17□□□□□ -0.62
MSH6-214ENST00000616033 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
MSH6-214ENST00000616033 ZNF552Q9H707 407 aaPredicted RBP11.17□□□□□ -0.62
MSH6-214ENST00000616033 ATG2AQ2TAZ0 1938 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 IGHV1OR15-9A0A0B4J2B8 117 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 KIR2DS1A0A191URI9 304 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 OTX1P32242 354 aaPredicted RBP11.17□□□□□ -0.62
MSH6-214ENST00000616033 KIR2DS4P43632 304 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 FOXG1P55316 489 aaPredicted RBP11.17□□□□□ -0.62
MSH6-214ENST00000616033 KIR2DS1Q14954 304 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 LRRC75BQ2VPJ9 315 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 WIPI1Q5MNZ9 446 aaPredicted RBP11.17□□□□□ -0.62
MSH6-214ENST00000616033 ASPHD1Q5U4P2 390 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 RNASEH2CQ8TDP1 164 aaKnown RBP11.17□□□□□ -0.62
MSH6-214ENST00000616033 OR2W1Q9Y3N9 320 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 ATP23Q9Y6H3 246 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 LRP4O75096 1905 aa11.17□□□□□ -0.62
MSH6-214ENST00000616033 ARFGEF3Q5TH69 2177 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 hCG_38984A0A1B0GV85 526 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 H0Y980 276 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 TFF1P04155 84 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 PMCHP20382 165 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 CRYGSP22914 178 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 OR10J1P30954 320 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 ACY3Q96HD9 319 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 OR2H1Q9GZK4 316 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 TMEM38BQ9NVV0 291 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 RARRES3Q9UL19 164 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 LOC102725191A0A1B0GVB3 256 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 ZNF90Q03938 601 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 NEIL1Q96FI4 390 aaPredicted RBP11.16□□□□□ -0.62
MSH6-214ENST00000616033 CHCHD2Q9Y6H1 151 aaPredicted RBP11.16□□□□□ -0.62
MSH6-214ENST00000616033 A0A0G2JMM0 328 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 A0A1W2PPB8 328 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 A0A1W2PRS3 328 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 KIR3DP1A8MWS1 328 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 ZG16O60844 167 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 RAMP3O60896 148 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 RHBDL1O75783 438 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 PIAS2O75928 621 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 CA6P23280 308 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 CEBPDP49716 269 aaPredicted RBP11.16□□□□□ -0.62
MSH6-214ENST00000616033 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
MSH6-214ENST00000616033 SLC25A45Q8N413 288 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 APH1AQ96BI3 265 aa11.16□□□□□ -0.62
MSH6-214ENST00000616033 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms