RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 M0R1X1 148 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 DUS4LO95620 317 aaKnown RBP14.3□□□□□ -0.12
SREK1-216ENST00000612404 ANXA3P12429 323 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 KLRD1Q13241 179 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 MSMO1Q15800 293 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 LIN54Q6MZP7 749 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 ODF3L1Q8IXM7 274 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 TP53RKQ96S44 253 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 CELSR1Q9NYQ6 3014 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.3□□□□□ -0.127e-17■■■■■ 33.5
SREK1-216ENST00000612404 F2RP25116 425 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 DCAF12L2Q5VW00 463 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 KCTD9Q7L273 389 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 C12orf45Q8N5I9 185 aaPredicted RBP14.3□□□□□ -0.12
SREK1-216ENST00000612404 LINC00311Q8N616 119 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 LINC01356Q8N9X3 169 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 DRAXINQ8NBI3 349 aaPredicted RBP14.3□□□□□ -0.12
SREK1-216ENST00000612404 PHB2Q99623 299 aa14.3□□□□□ -0.12
SREK1-216ENST00000612404 RNF212BA8MTL3 300 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 PROP1O75360 226 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 RRAS2P62070 204 aaPredicted RBP14.29□□□□□ -0.12
SREK1-216ENST00000612404 C1orf229Q6ZS94 237 aaPredicted RBP14.29□□□□□ -0.12
SREK1-216ENST00000612404 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.29□□□□□ -0.12
SREK1-216ENST00000612404 ZNF596Q8TC21 504 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 MITD1Q8WV92 249 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 TCTEX1D2Q8WW35 142 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 GALNT14Q96FL9 552 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 S1PR3Q99500 378 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 HIF1ANQ9NWT6 349 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 MMP9P14780 707 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 LINC00205P59089 165 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 ANKRD55Q3KP44 614 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 TNFRSF14Q92956 283 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 C1orf159Q96HA4 380 aa14.29□□□□□ -0.12
SREK1-216ENST00000612404 HSD17B10Q99714 261 aaKnown RBP14.29□□□□□ -0.12
SREK1-216ENST00000612404 UNKLQ9H9P5 680 aaKnown RBP14.29□□□□□ -0.12
SREK1-216ENST00000612404 FLNAP21333 2647 aaKnown RBP14.29□□□□□ -0.12
SREK1-216ENST00000612404 A0A1W2PRD5 423 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 A0A1W2PRF3 423 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 A0A1W2PRM7 423 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 IGLV1-47P01700 117 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 ARG1P05089 322 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 HOXB4P17483 251 aaPredicted RBP14.28□□□□□ -0.12
SREK1-216ENST00000612404 CR1P17927 2039 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 RPL30P62888 115 aaKnown RBP14.28□□□□□ -0.12
SREK1-216ENST00000612404 PAX8Q06710 450 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 CATR1Q13166 79 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 HLA-DRB5Q30154 266 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 OR2B11Q5JQS5 317 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 ZNF66Q6ZN08 573 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 BEND2Q8NDZ0 799 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 COQ8AQ8NI60 647 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 TMEM186Q96B77 213 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 TBX15Q96SF7 602 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 ZNF251Q9BRH9 671 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 LIN7CQ9NUP9 197 aaKnown RBP14.28□□□□□ -0.12
SREK1-216ENST00000612404 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
SREK1-216ENST00000612404 BAHCC1Q9P281 2608 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 TRAV20A0A0B4J274 112 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 LINC00473A8K010 186 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 H0Y980 276 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 RNASEK-C17orf49H0YIS7 233 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 IL3RAP26951 378 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 DUTP33316 252 aaKnown RBP14.27□□□□□ -0.12
SREK1-216ENST00000612404 EIF4EBP1Q13541 118 aaPredicted RBP14.27□□□□□ -0.12
SREK1-216ENST00000612404 TMEM187Q14656 261 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 FCN2Q15485 313 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 TMEM249Q2WGJ8 235 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 NCR3LG1Q68D85 454 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 OR11H6Q8NGC7 330 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 GLYATL2Q8WU03 294 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 LHX4Q969G2 390 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 MSI2Q96DH6 328 aaKnown RBP14.27□□□□□ -0.12
SREK1-216ENST00000612404 ITGB1BP2Q9UKP3 347 aa14.27□□□□□ -0.12
SREK1-216ENST00000612404 REG1BP48304 166 aa14.27□□□□□ -0.13
SREK1-216ENST00000612404 HCP5Q6MZN7 132 aa14.27□□□□□ -0.13
SREK1-216ENST00000612404 TMEM222Q9H0R3 208 aa14.27□□□□□ -0.13
SREK1-216ENST00000612404 MYO9AB2RTY4 2548 aa14.27□□□□□ -0.13
SREK1-216ENST00000612404 TEX15Q9BXT5 2789 aa14.27□□□□□ -0.13
SREK1-216ENST00000612404 ZNF469Q96JG9 3925 aaPredicted RBP14.26□□□□□ -0.13
SREK1-216ENST00000612404 HMX3A6NHT5 357 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 TGFAP01135 160 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 SERPINE2P07093 398 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 ZNF833PQ6ZTB9 187 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 OR4P4Q8NGL7 312 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 C7orf69Q9H7B7 122 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 MGAT4CQ9UBM8 478 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 AMMECR1Q9Y4X0 333 aaPredicted RBP14.26□□□□□ -0.13
SREK1-216ENST00000612404 BUB1B-PAK6H3BSN5 160 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 PFDN1O60925 122 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 IGHV4-31P0DP07 118 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 DIAPH2-AS1Q14236 149 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 LIAT1Q6ZQX7 453 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 AUP1Q9Y679 476 aa14.26□□□□□ -0.13
SREK1-216ENST00000612404 GOSR2O14653 212 aa14.25□□□□□ -0.13
SREK1-216ENST00000612404 C2orf68Q2NKX9 166 aa14.25□□□□□ -0.13
SREK1-216ENST00000612404 SPAG16Q8N0X2 631 aa14.25□□□□□ -0.13
SREK1-216ENST00000612404 OR11H7Q8NGC8 314 aa14.25□□□□□ -0.13
SREK1-216ENST00000612404 SMAD7O15105 426 aaKnown RBP14.24□□□□□ -0.13
SREK1-216ENST00000612404 B3GALNT1O75752 331 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms