RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SUCNR1Q9BXA5 334 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 FAM234AQ9H0X4 552 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 RIMS4Q9H426 269 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-217ENST00000611848 SPACA1Q9HBV2 294 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 SDHAF2Q9NX18 166 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 DUX4Q9UBX2 424 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 KCNIP3Q9Y2W7 256 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 I3L521 148 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 AVPP01185 164 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 HOXB5P09067 269 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 FAM157CP0CG43 387 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 PET100P0DJ07 73 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 PPIAL4GP0DN37 164 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 SELLP14151 372 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 HOXB4P17483 251 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-217ENST00000611848 NDUFB7P17568 137 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 SRD5A1P18405 259 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 AADACP22760 399 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 SRP14P37108 136 aaKnown RBP7.27□□□□□ -1.25
SMAD4-217ENST00000611848 COL10A1Q03692 680 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 RAB32Q13637 225 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 ZNF880Q6PDB4 577 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 CCDC28AQ8IWP9 274 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 EIF4E3Q8N5X7 224 aaKnown RBP7.27□□□□□ -1.25
SMAD4-217ENST00000611848 LY6G5BQ8NDX9 201 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 OR5D13Q8NGL4 314 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 C8orf46Q8TAG6 207 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 PPP1R35Q8TAP8 253 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 NANPQ8TBE9 248 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 RTN4IP1Q8WWV3 396 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-217ENST00000611848 TOMM40LQ969M1 308 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 SNX22Q96L94 193 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 DCTN5Q9BTE1 182 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 ZNF471Q9BX82 626 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-217ENST00000611848 SLC2A9Q9NRM0 540 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 CYTL1Q9NRR1 136 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 OR5AC2Q9NZP5 309 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 IL36RNQ9UBH0 155 aa7.27□□□□□ -1.25
SMAD4-217ENST00000611848 RPUSD1Q9UJJ7 312 aaKnown RBP7.27□□□□□ -1.25
SMAD4-217ENST00000611848 TRBV23-1A0A0A0MS06 115 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 TRDCB7Z8K6 153 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 K7N7A8 449 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 SH2D1BO14796 132 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 KCNAB3O43448 404 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 TUSC2O75896 110 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 HAND1O96004 215 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 PPYP01298 95 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 IFNA21P01568 189 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 TFF1P04155 84 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 TK1P04183 234 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 FGF2P09038 288 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 CTXN2P0C2S0 81 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 KCNJ3P48549 501 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 CEBPDP49716 269 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-217ENST00000611848 HERV-K104P61576 105 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 SCGB2A2Q13296 93 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 IAH1Q2TAA2 248 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-217ENST00000611848 ABCA11PQ4W5N1 156 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 IGSF11Q5DX21 431 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 GGNBP1Q5YKI7 109 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 LIAT1Q6ZQX7 453 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 C1orf229Q6ZS94 237 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-217ENST00000611848 IL17RELQ6ZVW7 336 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 HSD17B13Q7Z5P4 300 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-217ENST00000611848 LDLRAD3Q86YD5 345 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 FAM185AQ8N0U4 392 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 FGFRL1Q8N441 504 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 CCDC71LQ8N9Z2 235 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 SUMF2Q8NBJ7 301 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 H1FXQ92522 213 aaKnown RBP7.26□□□□□ -1.25
SMAD4-217ENST00000611848 PFDN2Q9UHV9 154 aa7.26□□□□□ -1.25
SMAD4-217ENST00000611848 TRAV24A0A0B4J272 114 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 MSGN1A6NI15 193 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 ZNF737O75373 536 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 OR5AC1P0C628 307 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 TPT1P13693 172 aaKnown RBP7.25□□□□□ -1.25
SMAD4-217ENST00000611848 LMO1P25800 156 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 NUP62P37198 522 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-217ENST00000611848 KIR2DS4P43632 304 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 FXYD4P59646 89 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 RND3P61587 244 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 KIR2DS1Q14954 304 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 PAN3Q58A45 887 aaKnown RBP7.25□□□□□ -1.25
SMAD4-217ENST00000611848 Q6P435 159 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 MRPL30Q8TCC3 161 aaKnown RBP7.25□□□□□ -1.25
SMAD4-217ENST00000611848 GLYATL2Q8WU03 294 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 SLC5A7Q9GZV3 580 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 GSKIPQ9P0R6 139 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 KPTNQ9Y664 436 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 NF1P21359 2839 aa7.25□□□□□ -1.25
SMAD4-217ENST00000611848 IGKV1-6A0A0C4DH72 117 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 DEGS1O15121 323 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 MPPED1O15442 326 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 DEDDO75618 318 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 DIRAS3O95661 229 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 OR2H2O95918 312 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 SCTP09683 121 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 ZNF44P15621 663 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 ZP3P21754 424 aa7.24□□□□□ -1.25
SMAD4-217ENST00000611848 DUSP1P28562 367 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms