RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 A0A1B0GUS0 222 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 LRP5LA4QPB2 252 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 OR2H2O95918 312 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 GCGP01275 180 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 HOXA6P31267 233 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 CXCL12P48061 93 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 WASF3Q9UPY6 502 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 GGCTO75223 188 aaKnown RBP12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 ZNF816Q0VGE8 651 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 SLC10A1Q14973 349 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 ZNF497Q6ZNH5 498 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 MRPL41Q8IXM3 137 aaKnown RBP12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 LINC00470Q9BZP3 86 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 OR6C3Q9NZP0 311 aa12.74□□□□□ -0.37
PCDHGB1-202ENST00000611598 TMEM265A0A087WTH1 108 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 LBHQ53QV2 105 aaPredicted RBP12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 SPINK9Q5DT21 86 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 WDR86Q86TI4 376 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 VASH2Q86V25 355 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 OR1L1Q8NH94 360 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 C5orf30Q96GV9 206 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 UBE2ZQ9H832 354 aaPredicted RBP12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 HSPB7Q9UBY9 170 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 GTF3C1Q12789 2109 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 DNAJC13O75165 2243 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 OR5B21A6NL26 309 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 COX5BP10606 129 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 SPCS3P61009 180 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 RPL30P62888 115 aaKnown RBP12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 TEX38Q6PEX7 206 aa12.73□□□□□ -0.37
PCDHGB1-202ENST00000611598 DOCK10Q96BY6 2186 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 PCSK5Q92824 1860 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 PMS2P5A8MQ11 134 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 TCAPO15273 167 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 ZG16O60844 167 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 CRYAAP02489 173 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 CYB561P49447 251 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 LHX2P50458 406 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 PAX5Q02548 391 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 ZNF808Q8N4W9 903 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 TMEM18Q96B42 140 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 ANAPC16Q96DE5 110 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 NEU1Q99519 415 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 TMEM147Q9BVK8 224 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 HES7Q9BYE0 225 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 MPC1Q9Y5U8 109 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 ODAMA1E959 279 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 FAM90A26D6RGX4 464 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 J3QT63 122 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 IL3RAP26951 378 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 FAM78BQ5VT40 261 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 BEND2Q8NDZ0 799 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 HLA-CQ95604 372 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 NEIL1Q96FI4 390 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 NPCDR1Q9BY65 106 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 MANBALQ9NQG1 85 aa12.72□□□□□ -0.37
PCDHGB1-202ENST00000611598 S1PR2O95136 353 aa12.71□□□□□ -0.37
PCDHGB1-202ENST00000611598 SELEP16581 610 aa12.71□□□□□ -0.37
PCDHGB1-202ENST00000611598 MPLP40238 635 aa12.71□□□□□ -0.37
PCDHGB1-202ENST00000611598 CEBPDP49716 269 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB1-202ENST00000611598 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB1-202ENST00000611598 DERL1Q9BUN8 251 aa12.71□□□□□ -0.37
PCDHGB1-202ENST00000611598 PKIBQ9C010 78 aa12.71□□□□□ -0.37
PCDHGB1-202ENST00000611598 PGPEP1LA6NFU8 196 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 C11orf94C9JXX5 98 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 MT-CO3P00414 261 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 TYMSP04818 313 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 CFIP05156 583 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 CLDN18P56856 261 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 NUTF2P61970 127 aaKnown RBP12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 C3AR1Q16581 482 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 ACOT6Q3I5F7 207 aaPredicted RBP12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 GCSAMLQ5JQS6 135 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 MOB1BQ7L9L4 216 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 GBGT1Q8N5D6 347 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 OR2D2Q9H210 308 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 CBLN4Q9NTU7 201 aa12.71□□□□□ -0.38
PCDHGB1-202ENST00000611598 LRRC30A6NM36 301 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 P0C879 139 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 COX5AP20674 150 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 BRWD1-AS2P59051 145 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 LINC00205P59089 165 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 UBE2G2P60604 165 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 PLP2Q04941 152 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 CISD2Q8N5K1 135 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 SNHG12Q9BXW3 62 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 MRPL37Q9BZE1 423 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 CACNA1DQ01668 2161 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 NTN3O00634 580 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 NUPR1O60356 82 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 SRP14P37108 136 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 OR10P1Q8NGE3 313 aa12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 APH1AQ96BI3 265 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms