RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 FGFRL1Q8N441 504 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 ZIC4Q8N9L1 334 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 CT55Q8WUE5 264 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 MS4A10Q96PG2 267 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 IMMP2LQ96T52 175 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 LRFN3Q9BTN0 628 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 TWSG1Q9GZX9 223 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 ATRXP46100 2492 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 PCNX2A6NKB5 2137 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 TRBV6-7A0A0A0MS04 114 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 C1QTNF9BB2RNN3 333 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 PITX3O75364 302 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 MT-CO3P00414 261 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 CST2P09228 141 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 STARD6P59095 220 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 IL24Q13007 206 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 SLC10A1Q14973 349 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 P2RY6Q15077 328 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 FAM89BQ8N5H3 189 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 TAAR3PQ9P1P4 343 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 ZNF391Q9UJN7 358 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.17□□□□□ -1.1
TPM1-233ENST00000610733 PINLYPA6NC86 204 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 F6UZH7 168 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 SYNGR3O43761 229 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 CELA3BP08861 270 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 CTXN2P0C2S0 81 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 SSTR5P35346 364 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 ICAM4Q14773 271 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 RSPO1Q2MKA7 263 aaPredicted RBP8.17□□□□□ -1.1
TPM1-233ENST00000610733 NUFIP2Q7Z417 695 aaKnown RBP8.17□□□□□ -1.1
TPM1-233ENST00000610733 NHLRC2Q8NBF2 726 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 OR2T10Q8NGZ9 312 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 TMEM18Q96B42 140 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 RAB40CQ96S21 281 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 TXN2Q99757 166 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 GINS3Q9BRX5 216 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 TMEM9BQ9NQ34 198 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 DEPPQ9NTK1 212 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 DLL3Q9NYJ7 618 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 SPINT2O43291 252 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 COX6A1P12074 109 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 PTGDSP41222 190 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 CD81P60033 236 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 ERVFC1-1P60608 527 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 ELOBQ15370 118 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 C20orf204Q6ZNR8 217 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 TCF23Q7RTU1 214 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 RAB24Q969Q5 203 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 ACY3Q96HD9 319 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 SIGLEC12Q96PQ1 595 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 B4E171 279 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 ENSAO43768 121 aaKnown RBP8.17□□□□□ -1.1
TPM1-233ENST00000610733 RAMP3O60896 148 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 UMODP07911 640 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 LINC00614P0C842 121 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 WNT5AP41221 380 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 TNFRSF9Q07011 255 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 TFF3Q07654 80 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 OR8B8Q15620 311 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 MRPL54Q6P161 138 aaKnown RBP8.17□□□□□ -1.1
TPM1-233ENST00000610733 DPPA3Q6W0C5 159 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 ATOH7Q8N100 152 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 SGMS2Q8NHU3 365 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 C22orf15Q8WYQ4 148 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 CLCF1Q9UBD9 225 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 VAX2Q9UIW0 290 aa8.17□□□□□ -1.1
TPM1-233ENST00000610733 K7N7A8 449 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 OR2H2O95918 312 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 BMI1P35226 326 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
TPM1-233ENST00000610733 Q6ZRM9 215 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 VN1R17PQ8TDU5 208 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 NABP1Q96AH0 204 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 TUBD1Q9UJT1 453 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 MED12LQ86YW9 2145 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 IGHV3-21A0A0B4J1V1 117 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 hCG_38984A0A1B0GV85 526 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 TOX3O15405 576 aaPredicted RBP8.16□□□□□ -1.1
TPM1-233ENST00000610733 S1PR2O95136 353 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 GYPAP02724 150 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 OR10J4P0C629 311 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 MEF2BQ02080 365 aaPredicted RBP8.16□□□□□ -1.1
TPM1-233ENST00000610733 COL10A1Q03692 680 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 FAM201AQ5SY85 155 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 ASPHD1Q5U4P2 390 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 ZNF439Q8NDP4 499 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 ST6GALNAC3Q8NDV1 305 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 SLC25A40Q8TBP6 338 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 PARLQ9H300 379 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 PARD6AQ9NPB6 346 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 FOXD3Q9UJU5 478 aaPredicted RBP8.16□□□□□ -1.1
TPM1-233ENST00000610733 LOC102724200A0A096LPH7 203 aaPredicted RBP8.16□□□□□ -1.1
TPM1-233ENST00000610733 A0A1W2PRD5 423 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 A0A1W2PRF3 423 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 A0A1W2PRM7 423 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 TNFSF15O95150 251 aa8.16□□□□□ -1.1
TPM1-233ENST00000610733 PTBP3O95758 552 aaKnown RBP8.16□□□□□ -1.1
TPM1-233ENST00000610733 FKBP2P26885 142 aaKnown RBP8.16□□□□□ -1.1
TPM1-233ENST00000610733 PPP1CBP62140 327 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms