RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 ADRA2AP08913 450 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 IRF3Q14653 427 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 C12orf54Q6X4T0 127 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 WIPI2Q9Y4P8 454 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 C7orf71A4D174 169 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 ITGBL1O95965 494 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-205ENST00000609104 KLK15Q9H2R5 256 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 PPP1R17O96001 155 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 AMY1AP04745 511 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 LINC00869P0C866 280 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 NAT2P11245 290 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 TMEM136Q6ZRR5 245 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 MS4A5Q9H3V2 200 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 WNT16Q9UBV4 365 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 AHDC1Q5TGY3 1603 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-205ENST00000609104 ARL14EPLP0DKL9 152 aa11.34□□□□□ -0.59
USP6NL-205ENST00000609104 C8orf82Q6P1X6 216 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-205ENST00000609104 A0A1W2PPV9 198 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 PMCHL1Q16048 86 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 FAM209BQ5JX69 171 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 C9orf40Q8IXQ3 194 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 GPHA2Q96T91 129 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 PPIAL4EA0A075B759 164 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 PPIAL4DF5H284 164 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 EIF3GO75821 320 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 PPIAL4FP0DN26 164 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 FBXW9Q5XUX1 488 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 CCL13Q99616 98 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 UQCR10Q9UDW1 63 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 PPIAL4AQ9Y536 164 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 SIRT4Q9Y6E7 314 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 H0Y980 276 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 DLX6P56179 175 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 NRIP2Q9BQI9 281 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 NUDT16L1Q9BRJ7 211 aaKnown RBP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 NPIPB6E9PJ23 425 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 OR52M1Q8NGK5 317 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 GUCD1Q96NT3 240 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 GREB1Q4ZG55 1949 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 CCL8P80075 99 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 LRRC3BQ96PB8 259 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 LMX1BO60663 402 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 ID4P47928 161 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 GCSAMLQ5JQS6 135 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 CCDC144NLQ6NUI1 221 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 ELF5Q9UKW6 265 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 IGHV4-34P06331 123 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 C1QCP02747 245 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 HKR1P10072 659 aa11.33□□□□□ -0.6
USP6NL-205ENST00000609104 CIRBPQ14011 172 aaKnown RBP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 CXorf66Q5JRM2 361 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-205ENST00000609104 DOCK6Q96HP0 2047 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 C16orf97H3BN30 126 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 SH3BGRL3Q9H299 93 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 FGF12P61328 243 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 GGTLC2Q14390 218 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 CASP8AP2Q9UKL3 1982 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 CENPVL1A0A0U1RR11 272 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 UPK3AO75631 287 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 FOLR2P14207 255 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 KIAA1644Q3SXP7 199 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 WNT5BQ9H1J7 359 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 SOX21Q9Y651 276 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-205ENST00000609104 RBBP6Q7Z6E9 1792 aaKnown RBP11.32□□□□□ -0.6
USP6NL-205ENST00000609104 A0A1W2PPC1 479 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 REG1AP05451 166 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 GMPPAQ96IJ6 420 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-205ENST00000609104 BEX4Q9NWD9 120 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-205ENST00000609104 YBX2Q9Y2T7 364 aaKnown RBP11.32□□□□□ -0.6
USP6NL-205ENST00000609104 FAM181BA6NEQ2 426 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP6NL-205ENST00000609104 TMEM177Q53S58 311 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 SCNM1Q9BWG6 230 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 PARLQ9H300 379 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 CCL27Q9Y4X3 112 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 CCL21O00585 134 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
USP6NL-205ENST00000609104 PF4V1P10720 104 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 ZNF506Q5JVG8 444 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 VAX1Q5SQQ9 334 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 ERASQ7Z444 233 aa11.32□□□□□ -0.6
USP6NL-205ENST00000609104 MYLKQ15746 1914 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 ALPK2Q86TB3 2170 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 CEACAM21Q3KPI0 293 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 ZNF831Q5JPB2 1677 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 CA11O75493 328 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 DTX4Q9Y2E6 619 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 C21orf140B9A014 251 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 IGKV1D-16P01601 117 aa11.31□□□□□ -0.6
USP6NL-205ENST00000609104 PEBP1P30086 187 aaKnown RBP11.31□□□□□ -0.6
USP6NL-205ENST00000609104 SGK494Q96LW2 274 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms