RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 HSPA12AO43301 675 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 TUSC2O75896 110 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 MMP23AO75900 390 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 HBZP02008 142 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 ZNF728P0DKX0 622 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 VSIG10L2P0DP72 767 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 UCP3P55916 312 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 PROK1P58294 105 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 TAS2R31P59538 309 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 RPL15P61313 204 aaKnown RBP9.32□□□□□ -0.92
LINC00539-204ENST00000608957 PRR31Q5SQ13 230 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 GLDNQ6ZMI3 551 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-204ENST00000608957 H1FOOQ8IZA3 346 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-204ENST00000608957 PIFOQ8TCI5 191 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 GALMQ96C23 342 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 SEC22CQ9BRL7 303 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 ALX4Q9H161 411 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-204ENST00000608957 GHITMQ9H3K2 345 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 C5orf66Q9H5L9 145 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 GPN1Q9HCN4 374 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-204ENST00000608957 RAB9BQ9NP90 201 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 OR1A1Q9P1Q5 309 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 SLC23A1Q9UHI7 598 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 GPR132Q9UNW8 380 aa9.32□□□□□ -0.92
LINC00539-204ENST00000608957 C14orf166Q9Y224 244 aaKnown RBP9.32□□□□□ -0.92
LINC00539-204ENST00000608957 TET2Q6N021 2002 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-204ENST00000608957 MGAM2Q2M2H8 2515 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 TRGV10A0A0A0MS01 117 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 A0A1B0GUS0 222 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 hADV38S2A0JD32 116 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 SNRPGP15A8MWD9 76 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CREBL2O60519 120 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CTSDP07339 412 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-204ENST00000608957 IGHV1-8P0DP01 117 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 GZMHP20718 246 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 ZBTB25P24278 435 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 UBE2MP61081 183 aaKnown RBP9.31□□□□□ -0.92
LINC00539-204ENST00000608957 MEF2CQ06413 473 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CBX3Q13185 183 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 LY6EQ16553 131 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 ZNF626Q68DY1 528 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 SLC25A42Q86VD7 318 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 ZNF565Q8N9K5 539 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 ZFAND1Q8TCF1 268 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CHAC2Q8WUX2 184 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CORO2AQ92828 525 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 TOMM40LQ969M1 308 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 ARL11Q969Q4 196 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 SSX3Q99909 188 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CITED1Q99966 193 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 OR51J1Q9H342 316 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 C16orf95Q9H693 158 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 HEXA-AS1Q9H8Q6 139 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 ZNF221Q9UK13 617 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 RNF114Q9Y508 228 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 LINC00312Q9Y6C7 94 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 PKD1L1Q8TDX9 2849 aa9.31□□□□□ -0.92
LINC00539-204ENST00000608957 A0A1W2PPH5 198 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 ZNF729A6NN14 1252 aaPredicted RBP9.3□□□□□ -0.92
LINC00539-204ENST00000608957 CHST1O43916 411 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 PFDN1O60925 122 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 TSPAN9O75954 239 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 RBP4P02753 201 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 OR4E1P0C645 316 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 TRAPPC2P0DI81 140 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 TRAPPC2BP0DI82 140 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 PI3P19957 117 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 RRAS2P62070 204 aaPredicted RBP9.3□□□□□ -0.92
LINC00539-204ENST00000608957 HTD2P86397 168 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 GNMTQ14749 295 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 C17orf58Q2M2W7 97 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 LRRC75BQ2VPJ9 315 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 C4orf46Q504U0 113 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 DHRS7BQ6IAN0 325 aaPredicted RBP9.3□□□□□ -0.92
LINC00539-204ENST00000608957 SLC38A6Q8IZM9 456 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 ADAD2Q8NCV1 583 aaKnown RBP9.3□□□□□ -0.92
LINC00539-204ENST00000608957 OR52B4Q8NGK2 314 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 OR5R1Q8NH85 324 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 TMEM230Q96A57 120 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 ZNF714Q96N38 554 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 RTBDNQ9BSG5 229 aaPredicted RBP9.3□□□□□ -0.92
LINC00539-204ENST00000608957 RDH8Q9NYR8 311 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 JPT1Q9UK76 154 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 UBE2J1Q9Y385 318 aaPredicted RBP9.3□□□□□ -0.92
LINC00539-204ENST00000608957 OR2W1Q9Y3N9 320 aa9.3□□□□□ -0.92
LINC00539-204ENST00000608957 IGKV1D-13A0A0B4J2D9 117 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 KBTBD11-OT1A0A1B0GTJ5 212 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 HMX3A6NHT5 357 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 F2RL2O00254 374 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 HLA-AP01891 365 aaKnown RBP9.29□□□□□ -0.92
LINC00539-204ENST00000608957 ARG1P05089 322 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 CGB3P0DN86 165 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 CGB7P0DN87 165 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 IGKV1-13P0DP09 117 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 AKR1C4P17516 323 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 CEACAM6P40199 344 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 DHODHQ02127 395 aa9.29□□□□□ -0.92
LINC00539-204ENST00000608957 DHRS2Q13268 280 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms