RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 A0A1W2PPE3 182 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 SCO1O75880 301 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 IFNA5P01569 189 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 SNRNP70P08621 437 aaKnown RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 HIST1H3AP68431 136 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 HIST2H3PS2Q5TEC6 136 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 MINOS1Q5TGZ0 78 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 IL17RELQ6ZVW7 336 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 HIST2H3AQ71DI3 136 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 LRRTM1Q86UE6 522 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 GVQW1Q8N7I0 195 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 LILRB1Q8NHL6 650 aaPredicted RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 SPSB4Q96A44 273 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 TMEM230Q96A57 120 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 GPR61Q9BZJ8 451 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 SEBOXQ9HB31 216 aaPredicted RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 JPT1Q9UK76 154 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 MINOS1-NBL1R4GNA1 71 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 C2CD3Q4AC94 2353 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 A0A1B0GV50 99 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 SLC33A1O00400 549 aaPredicted RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 TIMM23O14925 209 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 NPBWR2P48146 333 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 RPS11P62280 158 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 RPL23AP62750 156 aaKnown RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 PPP1R1AQ13522 171 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 FAM120AOSQ5T036 256 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 DNM1P46Q6ZS02 220 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 VMO1Q7Z5L0 202 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 LGI3Q8N145 548 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 CORO2AQ92828 525 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 TMEM133Q9H2Q1 129 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 ELF5Q9UKW6 265 aaPredicted RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 WASHC3Q9Y3C0 194 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 HELZ2Q9BYK8 2649 aaKnown RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 IGHV2-70DA0A0C4DH43 119 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 RPS10-NUDT3A0A1W2PQS6 291 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 PQLC2LA1A4F0 135 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 OOSP1A8MZH6 123 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 GPR31O00270 319 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 CD5LO43866 347 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 CCL3L1P16619 93 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 M6PRP20645 277 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 PPP1CCP36873 323 aaKnown RBP4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 GATA4P43694 442 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 GUSBP1Q15486 140 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 FAM74A1Q5RGS3 127 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 BAP18Q8IXM2 172 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 TMED6Q8WW62 240 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 SLC35E1Q96K37 410 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 PECRQ9BY49 303 aa4.31□□□□□ -1.72
SCARNA15-201ENST00000607520 KBTBD11-OT1A0A1B0GTJ5 212 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 C9orf170A2RU37 121 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 LINC00862A6NCI5 91 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 H3BUX3 64 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 SNAPINO95295 136 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 WNT2P09544 360 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 FAM157CP0CG43 387 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 PRTN3P24158 256 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 ATPAF1Q5TC12 328 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 PXDC1Q5TGL8 231 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 UNQ5815/PRO19632Q6UWF5 114 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 CALHM1Q8IU99 346 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 ZBTB34Q8NCN2 500 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 OR11H4Q8NGC9 324 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 OR4D10Q8NGI6 311 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 Q8TCH9 128 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 RGP1Q92546 391 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 MOB3AQ96BX8 217 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 ZNF524Q96C55 264 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 ALX4Q9H161 411 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 FAM212BQ9NTI7 297 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 GAR1Q9NY12 217 aaKnown RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 ZNF107Q9UII5 783 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 USP9XQ93008 2570 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 MED12LQ86YW9 2145 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 IGHV1-69DA0A0B4J2H0 117 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 A0A1W2PN81 502 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 TCRBV4S1A1TA0A5B7 111 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 MLNRO43193 412 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 DUS4LO95620 317 aaKnown RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 IGHV1-69P01742 117 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 IGHV2-5P01817 119 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 VSIG8P0DPA2 414 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 DTYMKP23919 212 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 CHRNA7P36544 502 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 ZNF816Q0VGE8 651 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 SIGIRRQ6IA17 410 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 LILRB2Q8N423 598 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 TNFRSF14Q92956 283 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 PTX4Q96A99 478 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 MALSU1Q96EH3 234 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 GRAMD2BQ96HH9 432 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 C2orf50Q96LR7 162 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 HSD17B10Q99714 261 aaKnown RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 ELOVL1Q9BW60 279 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 SAV1Q9H4B6 383 aaPredicted RBP4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 PLEKHA3Q9HB20 300 aa4.3□□□□□ -1.72
SCARNA15-201ENST00000607520 TBL2Q9Y4P3 447 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms