RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 SPP1P10451 314 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 GLRXP35754 106 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 PRB3Q04118 309 aaPredicted RBP13.25□□□□□ -0.29
CTSA-214ENST00000606788 HAGHQ16775 308 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 TRGV8A0A0C4DH27 118 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 ODAMA1E959 279 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 SYNGR2O43760 224 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 TIMP3P35625 211 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 F2RL1P55085 397 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 BRWD1-AS2P59051 145 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 BSPH1Q075Z2 132 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 SLC35E4Q6ICL7 350 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 C11orf1Q9H5F2 150 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 RAXQ9Y2V3 346 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 SRRM5B3KS81 715 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 FCGR3BO75015 233 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 ZNF737O75373 536 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 ELLP55199 621 aaPredicted RBP13.24□□□□□ -0.29
CTSA-214ENST00000606788 NCR3LG1Q68D85 454 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 SLC25A31Q9H0C2 315 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 ZFP57Q9NU63 452 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 SPINT2O43291 252 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 IGHV1-46P01743 117 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 DANCRP0C864 163 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 LMO1P25800 156 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 ZNF134P52741 427 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 NKX6-1P78426 367 aaPredicted RBP13.24□□□□□ -0.29
CTSA-214ENST00000606788 STX12Q86Y82 276 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 ZNF645Q8N7E2 425 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 C17orf50Q8WW18 174 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 GINS3Q9BRX5 216 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 SFXN3Q9BWM7 321 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 VSIRQ9H7M9 311 aa13.24□□□□□ -0.29
CTSA-214ENST00000606788 DYSFO75923 2080 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 DPRXA6NFQ7 191 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 M0R1X1 148 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 DEFA4P12838 97 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 CEACAM8P31997 349 aaPredicted RBP13.23□□□□□ -0.29
CTSA-214ENST00000606788 FAM90A1Q86YD7 464 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 SFT2D1Q8WV19 159 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 SAT2Q96F10 170 aaPredicted RBP13.23□□□□□ -0.29
CTSA-214ENST00000606788 GCM1Q9NP62 436 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 HCFC1P51610 2035 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 CLDN14O95500 239 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 FGF8P55075 233 aaPredicted RBP13.23□□□□□ -0.29
CTSA-214ENST00000606788 RPL23AP62750 156 aaKnown RBP13.23□□□□□ -0.29
CTSA-214ENST00000606788 KRTCAP3Q53RY4 240 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 LILRB2Q8N423 598 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 CD300LFQ8TDQ1 290 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 PLXNB1O43157 2135 aa13.23□□□□□ -0.29
CTSA-214ENST00000606788 GPR12P47775 334 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 SELENOVP59797 346 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 GUK1Q16774 197 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 LOC105371267A0A1B0GV96 52 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 TMPRSS2O15393 492 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 OR4A8P0C604 315 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 NDUFB7P17568 137 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 TDGF1P3P51864 188 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 SVBPQ8N300 66 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 CCL17Q92583 94 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 PARP11Q9NR21 331 aa13.22□□□□□ -0.29
CTSA-214ENST00000606788 A0A1B0GU03 582 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 ZG16O60844 167 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 PROP1O75360 226 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 PITX3O75364 302 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 SEC11BP0C7V7 166 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 ZNF266Q14584 549 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 IL34Q6ZMJ4 242 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 C1orf229Q6ZS94 237 aaPredicted RBP13.21□□□□□ -0.29
CTSA-214ENST00000606788 HAPLN4Q86UW8 402 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 WNK2Q9Y3S1 2297 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 CLEC18AA5D8T8 446 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 MMP23AO75900 390 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 LCN15Q6UWW0 184 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 CLEC18CQ8NCF0 446 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 RBKSQ9H477 322 aa13.21□□□□□ -0.29
CTSA-214ENST00000606788 FAM90A27PA6NNH2 459 aa13.21□□□□□ -0.3
CTSA-214ENST00000606788 C15orf65H3BRN8 121 aa13.21□□□□□ -0.3
CTSA-214ENST00000606788 M0R036 132 aa13.21□□□□□ -0.3
CTSA-214ENST00000606788 SNRNP70P08621 437 aaKnown RBP13.21□□□□□ -0.3
CTSA-214ENST00000606788 UBE2KP61086 200 aa13.21□□□□□ -0.3
CTSA-214ENST00000606788 UQCC3Q6UW78 93 aa13.21□□□□□ -0.3
CTSA-214ENST00000606788 NPIPB11E5RHQ5 1161 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 OPN1MWP04001 364 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 OPN1MW2P0DN77 364 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 OPN1MW3P0DN78 364 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 PTAFRP25105 342 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
CTSA-214ENST00000606788 AIFM2Q9BRQ8 373 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 MALRD1Q5VYJ5 2156 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 GFRA3O60609 400 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 SNCAP37840 140 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 SMUG1Q53HV7 270 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 AKR1C8PQ5T2L2 129 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 H2BFWTQ7Z2G1 175 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
CTSA-214ENST00000606788 CEBPZOSA8MTT3 80 aa13.19□□□□□ -0.3
CTSA-214ENST00000606788 THBDP07204 575 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms