RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PDE7AQ13946 482 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 UTF1Q5T230 341 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 DCAF12Q5T6F0 453 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 Q6AWC8 147 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 FBXL14Q8N1E6 418 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 OSR2Q8N2R0 312 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 TEX29Q8N6K0 151 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 ZFP62Q8NB50 900 aaPredicted RBP7.54□□□□□ -1.2
COMMD3-215ENST00000602574 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 OR5D14Q8NGL3 314 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 OR1L1Q8NH94 360 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 C8orf46Q8TAG6 207 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 ZNRF4Q8WWF5 429 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 OR5P3Q8WZ94 311 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 GLYATL1Q969I3 302 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 KLHDC7BQ96G42 594 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 RPRMQ9NS64 109 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 GNG13Q9P2W3 67 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 PAPPA2Q9BXP8 1791 aa7.54□□□□□ -1.2
COMMD3-215ENST00000602574 LRRC3CA6NJW4 275 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 RHODO00212 210 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 SLC31A1O15431 190 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 CRXO43186 299 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 C8orf89P0DMQ9 161 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 ECI1P42126 302 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 ZNF133P52736 654 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 SEC61GP60059 68 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 RELBQ01201 579 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 ZNF324BQ6AW86 544 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 RNASEKQ6P5S7 137 aaKnown RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 DOK3Q7L591 496 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 OOSP2Q86WS3 158 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 LSM10Q969L4 123 aaKnown RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 MSI2Q96DH6 328 aaKnown RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 VGLL1Q99990 258 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 PDCD1LG2Q9BQ51 273 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 TMUB1Q9BVT8 246 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 CLEC7AQ9BXN2 247 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 MRPL18Q9H0U6 180 aaKnown RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 PDFQ9HBH1 243 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 OR1A1Q9P1Q5 309 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 INSL5Q9Y5Q6 135 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 KIF26AQ9ULI4 1882 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 TRGV10A0A0A0MS01 117 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 C3orf80F5H4A9 247 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 ETHE1O95571 254 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 ZNF121P58317 390 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 RPS16P62249 146 aaKnown RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 MFGE8Q08431 387 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 FRG2Q64ET8 278 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 LSRQ86X29 649 aaPredicted RBP7.53□□□□□ -1.2
COMMD3-215ENST00000602574 TMEM123Q8N131 208 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 SPEM1Q8N4L4 309 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 OR5D13Q8NGL4 314 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 FAM174AQ8TBP5 190 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 DDB2Q92466 427 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 NEURL3Q96EH8 262 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 FRG2BQ96QU4 278 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 EBPLQ9BY08 206 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
COMMD3-215ENST00000602574 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 A0A1W2PP11 408 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 A0A1W2PPV9 198 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 J3KT08 172 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 RS1O15537 224 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 GYPAP02724 150 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 MT-ATP8P03928 68 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 FUT6P51993 359 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 LRRC25Q8N386 305 aaPredicted RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 C10orf35Q96D05 121 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 FAM103A1Q9BTL3 118 aaKnown RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 COL25A1Q9BXS0 654 aaPredicted RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 IFI27L2Q9H2X8 130 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 LIN7CQ9NUP9 197 aaKnown RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 LSM5Q9Y4Y9 91 aaKnown RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 DENND4CQ5VZ89 1909 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 TNRC6AQ8NDV7 1962 aaKnown RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 FNDC10F2Z333 226 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 HAX1O00165 279 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF737O75373 536 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 NDUFV3P56181 108 aaKnown RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 LGALS4P56470 323 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 UBE2G1P62253 170 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 MS4A13Q5J8X5 152 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 FAM78AQ5JUQ0 283 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 ABHD17CQ6PCB6 329 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 ADGRE4PQ86SQ3 457 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 LHFPL1Q86WI0 220 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 OR2M3Q8NG83 312 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 OR4A16Q8NH70 328 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 ZNRF2Q8NHG8 242 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 DIO2Q92813 273 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 ABHD14BQ96IU4 210 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 AMELYQ99218 206 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 CDX2Q99626 313 aaPredicted RBP7.52□□□□□ -1.21
COMMD3-215ENST00000602574 GNB1LQ9BYB4 327 aa7.52□□□□□ -1.21
COMMD3-215ENST00000602574 DUSP13Q9UII6 198 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms