RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RNF150Q9ULK6 438 aa10.15□□□□□ -0.78
RPS28-204ENST00000602140 TRBV6-6A0A0A6YYG2 114 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 PTGES3LE9PB15 166 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 ITGB1BP1O14713 200 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 SOCS1O15524 211 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 HSPA12AO43301 675 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 BPNT1O95861 308 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 HSPB1P04792 205 aaKnown RBP10.14□□□□□ -0.79
RPS28-204ENST00000602140 CDK1P06493 297 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 FRMD6-AS1P0C7T7 363 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 CD37P11049 281 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 SNRPBP14678 240 aaKnown RBP10.14□□□□□ -0.79
RPS28-204ENST00000602140 ZBTB25P24278 435 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 TPPP2P59282 170 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 HLA-DRB3P79483 266 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 PSG5Q15238 335 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 AKIRIN2Q53H80 203 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 ZNF562Q6V9R5 426 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 LFNGQ8NES3 379 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 OR6Q1Q8NGQ2 317 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 MUC7Q8TAX7 377 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 EDARADDQ8WWZ3 215 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 RNF5Q99942 180 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 C11orf54Q9H0W9 315 aaPredicted RBP10.14□□□□□ -0.79
RPS28-204ENST00000602140 LPAR5Q9H1C0 372 aa10.14□□□□□ -0.79
RPS28-204ENST00000602140 RIMS4Q9H426 269 aaPredicted RBP10.14□□□□□ -0.79
RPS28-204ENST00000602140 SORL1Q92673 2214 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 TRIM64CA6NLI5 447 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 PROP1O75360 226 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 CA2P00918 260 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 SCTP09683 121 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 UCHL1P09936 223 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 OR8U9P0C7N5 309 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 CPEP16870 476 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 CD40LGP29965 261 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 LINC00205P59089 165 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 PITPNAQ00169 270 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 P2RY14Q15391 338 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 SPHARQ15513 63 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 CASC10Q5T4H9 136 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
RPS28-204ENST00000602140 RNLSQ5VYX0 342 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 OR6M1Q8NGM8 313 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 FLYWCH2Q96CP2 140 aaKnown RBP10.13□□□□□ -0.79
RPS28-204ENST00000602140 RHOVQ96L33 236 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 OR4C12Q96R67 309 aa10.13□□□□□ -0.79
RPS28-204ENST00000602140 TSNAXQ99598 290 aaKnown RBP10.13□□□□□ -0.79
RPS28-204ENST00000602140 URM1Q9BTM9 101 aaKnown RBP10.13□□□□□ -0.79
RPS28-204ENST00000602140 LSM2Q9Y333 95 aaKnown RBP10.13□□□□□ -0.79
RPS28-204ENST00000602140 TRGV3P03979 118 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 IGKV1-16P04430 117 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 TFAP2AP05549 437 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 ARSBP15848 533 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 RPS16P62249 146 aaKnown RBP10.12□□□□□ -0.79
RPS28-204ENST00000602140 MED22Q15528 200 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 SRSF7Q16629 238 aaKnown RBP eCLIP10.12□□□□□ -0.79
RPS28-204ENST00000602140 FAM89BQ8N5H3 189 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 TMEM203Q969S6 136 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 PTX4Q96A99 478 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 SLA2Q9H6Q3 261 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 ZMAT4Q9H898 229 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 PLGRKTQ9HBL7 147 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 Q9N2K0 584 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 ZNF221Q9UK13 617 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 MGAT4AQ9UM21 535 aa10.12□□□□□ -0.79
RPS28-204ENST00000602140 SLC17A2O00624 439 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 CASQ2O14958 399 aaPredicted RBP10.11□□□□□ -0.79
RPS28-204ENST00000602140 SPDEFO95238 335 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 VEGFCP49767 419 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 TMEM50BP56557 158 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 FXYD3Q14802 87 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 LIPKQ5VXJ0 399 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 HAPLN4Q86UW8 402 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 ZNF383Q8NA42 475 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 GRPEL2Q8TAA5 225 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 UFD1Q92890 307 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 ARHGAP5-AS1Q96IT6 56 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 GFI1Q99684 422 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 CMSS1Q9BQ75 279 aaKnown RBP10.11□□□□□ -0.79
RPS28-204ENST00000602140 ELOVL1Q9BW60 279 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 C12orf4Q9NQ89 552 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 ZNF355PQ9NSJ1 428 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 HSF4Q9ULV5 492 aa10.11□□□□□ -0.79
RPS28-204ENST00000602140 AK6Q9Y3D8 172 aaKnown RBP10.11□□□□□ -0.79
RPS28-204ENST00000602140 IGKV1-6A0A0C4DH72 117 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 FOXI3A8MTJ6 420 aaPredicted RBP10.1□□□□□ -0.79
RPS28-204ENST00000602140 ARPC1BO15143 372 aaKnown RBP10.1□□□□□ -0.79
RPS28-204ENST00000602140 SLC25A17O43808 307 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 APOA2P02652 100 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 TMEM91Q6ZNR0 172 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 PDPNQ86YL7 162 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 PECRQ9BY49 303 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 VCXQ9H320 206 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 RANGRFQ9HD47 186 aaPredicted RBP10.1□□□□□ -0.79
RPS28-204ENST00000602140 SCN3BQ9NY72 215 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 RDH8Q9NYR8 311 aa10.1□□□□□ -0.79
RPS28-204ENST00000602140 C13orf42A0A1B0GVH6 325 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 TRDCB7Z8K6 153 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 M0R1X1 148 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms