RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 REG4Q9BYZ8 158 aa14.24□□□□□ -0.13
DDX49-213ENST00000602113 KCNIP3Q9Y2W7 256 aa14.24□□□□□ -0.13
DDX49-213ENST00000602113 RAB29O14966 203 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 MMP9P14780 707 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 CXCL3P19876 107 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 LOXL1Q08397 574 aaPredicted RBP14.23□□□□□ -0.13
DDX49-213ENST00000602113 VMO1Q7Z5L0 202 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 PNKDQ8N490 385 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.23□□□□□ -0.13
DDX49-213ENST00000602113 PHB2Q99623 299 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 NEURL2Q9BR09 285 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 UNKLQ9H9P5 680 aaKnown RBP14.23□□□□□ -0.13
DDX49-213ENST00000602113 INSIG2Q9Y5U4 225 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 H0Y980 276 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 M0R1X1 148 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 IGLV1-47P01700 117 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 TRAPPC2P0DI81 140 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 TRAPPC2BP0DI82 140 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 KLRD1Q13241 179 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 DRAXINQ8NBI3 349 aaPredicted RBP14.23□□□□□ -0.13
DDX49-213ENST00000602113 MAPK1IP1LQ8NDC0 245 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 MSI2Q96DH6 328 aaKnown RBP14.23□□□□□ -0.13
DDX49-213ENST00000602113 TMEM222Q9H0R3 208 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 PIPOXQ9P0Z9 390 aa14.23□□□□□ -0.13
DDX49-213ENST00000602113 A0A0B4J2A0 478 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 DBX1A6NMT0 343 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 LINC00473A8K010 186 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 A8MV72 311 aaPredicted RBP14.22□□□□□ -0.13
DDX49-213ENST00000602113 TOR1AO14656 332 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 MSMBP08118 114 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 ANXA3P12429 323 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 ZNF16P17020 682 aaPredicted RBP14.22□□□□□ -0.13
DDX49-213ENST00000602113 DUTP33316 252 aaKnown RBP14.22□□□□□ -0.13
DDX49-213ENST00000602113 CD300CQ08708 224 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 C11orf88Q6PI97 169 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 OR13D1Q8NGV5 346 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 OR10X1Q8NGY0 326 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 LHFPL5Q8TAF8 219 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 TBX15Q96SF7 602 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 HSD17B10Q99714 261 aaKnown RBP14.22□□□□□ -0.13
DDX49-213ENST00000602113 SHPKQ9UHJ6 478 aa14.22□□□□□ -0.13
DDX49-213ENST00000602113 B4DSR2 109 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 TOX4O94842 621 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 UCP1P25874 307 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 BRWD1-AS2P59051 145 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 PAX8Q06710 450 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 HLA-DRB5Q30154 266 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 NCR3LG1Q68D85 454 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 ZNF66Q6ZN08 573 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 LIAT1Q6ZQX7 453 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 ZNF833PQ6ZTB9 187 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 BEND2Q8NDZ0 799 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 WFDC11Q8NEX6 87 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 OR11H6Q8NGC7 330 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 COQ8AQ8NI60 647 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 ST6GALNAC6Q969X2 333 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 PCGF1Q9BSM1 259 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 HEXA-AS1Q9H8Q6 139 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 MGAT4CQ9UBM8 478 aa14.21□□□□□ -0.13
DDX49-213ENST00000602113 RNF212BA8MTL3 300 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 RNASEK-C17orf49H0YIS7 233 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 PFDN1O60925 122 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 HOXB4P17483 251 aaPredicted RBP14.2□□□□□ -0.14
DDX49-213ENST00000602113 ZNF137PP52743 207 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 PRRX1P54821 245 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 DIAPH2-AS1Q14236 149 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 OR4P4Q8NGL7 312 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 TCTEX1D2Q8WW35 142 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 FOXC2Q99958 501 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 LIN7CQ9NUP9 197 aaKnown RBP14.2□□□□□ -0.14
DDX49-213ENST00000602113 CSMD1Q96PZ7 3565 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 CCSO14618 274 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 GOSR2O14653 212 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 SIX6O95475 246 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 ZNF585BQ52M93 769 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 OR2B11Q5JQS5 317 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 AKAP14Q86UN6 197 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 PDZD9Q8IXQ8 264 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 LRTM2Q8N967 370 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 ST6GAL2Q96JF0 529 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 TMEM56Q96MV1 263 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 S1PR3Q99500 378 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 TMEM56-RWDD3S4R434 201 aa14.2□□□□□ -0.14
DDX49-213ENST00000602113 PRRC2AP48634 2157 aaKnown RBP14.19□□□□□ -0.14
DDX49-213ENST00000602113 ODF3BA8MYP8 253 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 BUB1B-PAK6H3BSN5 160 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 ADAP1O75689 374 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 B3GALNT1O75752 331 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 CCNKO75909 580 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 CDS2O95674 445 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 CT45A6P0DMU7 189 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 CT45A5P0DMU8 189 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 CT45A7P0DMV0 189 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 CD83Q01151 205 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 CATR1Q13166 79 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 LDLRAD2Q5SZI1 272 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 DCAF12L2Q5VW00 463 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 LGI3Q8N145 548 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 LINC01356Q8N9X3 169 aa14.19□□□□□ -0.14
DDX49-213ENST00000602113 ZNF383Q8NA42 475 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms