RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 LAMTOR1Q6IAA8 161 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 GSG1LQ6UXU4 331 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 VMO1Q7Z5L0 202 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 C5orf24Q7Z6I8 188 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 LDLRAD3Q86YD5 345 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 TPRX1Q8N7U7 411 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 OR11H4Q8NGC9 324 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 OR10V1Q8NGI7 309 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 FAM216AQ8WUB2 273 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 SECTM1Q8WVN6 248 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 IL1F10Q8WWZ1 152 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 CORO2AQ92828 525 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 PDCD10Q9BUL8 212 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 SLC5A7Q9GZV3 580 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 SIRPDQ9H106 197 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 HEXA-AS1Q9H8Q6 139 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
UPF1-213ENST00000601981 TRAV39A0A0B4J263 110 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 TRAV40A0A0B4J280 105 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 HMSDA8MTL9 139 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 CCSO14618 274 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 MPPED1O15442 326 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 HSPA12AO43301 675 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 CRLF1O75462 422 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 B3GALNT1O75752 331 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 HBZP02008 142 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 GZMHP20718 246 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 PRTN3P24158 256 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 S100GP29377 79 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 LUMP51884 338 aaPredicted RBP8.25□□□□□ -1.09
UPF1-213ENST00000601981 SRPXP78539 464 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 CYCSP99999 105 aaKnown RBP8.25□□□□□ -1.09
UPF1-213ENST00000601981 ZNF273Q14593 569 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 TMEM187Q14656 261 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 MSMO1Q15800 293 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 Q5BKY6 102 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 ZNF818PQ6ZRF7 136 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 CMTM1Q8IZ96 169 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 LRTM2Q8N967 370 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 BVESQ8NE79 360 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 OR13A1Q8NGR1 328 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 OR13D1Q8NGV5 346 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 OR1L1Q8NH94 360 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 GALMQ96C23 342 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 NMES1Q9C002 83 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 UNKLQ9H9P5 680 aaKnown RBP8.25□□□□□ -1.09
UPF1-213ENST00000601981 SIRT7Q9NRC8 400 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 NUP50Q9UKX7 468 aa8.25□□□□□ -1.09
UPF1-213ENST00000601981 C5orf51A6NDU8 294 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 C17orf98A8MV24 154 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 FAM25EA8MYX2 175 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 C15orf65H3BRN8 121 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 RGS13O14921 159 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 SPINT2O43291 252 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 OR5AC1P0C628 307 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 FAM157CP0CG43 387 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 MMP9P14780 707 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 CCL3L1P16619 93 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 HTD2P86397 168 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 TMEM30BQ3MIR4 351 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 LIAT1Q6ZQX7 453 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 IL17RELQ6ZVW7 336 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 LGI3Q8N145 548 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 OR10A7Q8NGE5 316 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 GRPEL2Q8TAA5 225 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 MRGPRDQ8TDS7 321 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 LHX4Q969G2 390 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 WDR89Q96FK6 387 aaPredicted RBP8.24□□□□□ -1.09
UPF1-213ENST00000601981 AKR1E2Q96JD6 320 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 TBX15Q96SF7 602 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 GON7Q9BXV9 100 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 MS4A7Q9GZW8 240 aaPredicted RBP8.24□□□□□ -1.09
UPF1-213ENST00000601981 SLA2Q9H6Q3 261 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 CCL28Q9NRJ3 127 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 PLSCR3Q9NRY6 295 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 RDH8Q9NYR8 311 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 CALYQ9NYX4 217 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 COMMD9Q9P000 198 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 BOLA1Q9Y3E2 137 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 HSPB11Q9Y547 144 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 SESN1Q9Y6P5 492 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 FBN3Q75N90 2809 aa8.24□□□□□ -1.09
UPF1-213ENST00000601981 TRAV14DV4A0A0A6YYC5 116 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 PIGBOS1A0A0B4J2F0 54 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 C3orf85A0A1B0GTC6 90 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 KBTBD11-OT1A0A1B0GTJ5 212 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 H0Y980 276 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 F2RL2O00254 374 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 HSD17B6O14756 317 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 ADAP1O75689 374 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 AVPP01185 164 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 IFNA21P01568 189 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 IGHV1-8P0DP01 117 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 SLC25A4P12235 298 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 C4BPBP20851 252 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 EPHA1P21709 976 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 CEACAM6P40199 344 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 UBE2E1P51965 193 aa8.23□□□□□ -1.09
UPF1-213ENST00000601981 IFITM2Q01629 132 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms