RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 DDB2Q92466 427 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 ABHD14BQ96IU4 210 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 RNF5Q99942 180 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 CITED2Q99967 270 aaPredicted RBP6.92□□□□□ -1.3
SSBP4-208ENST00000600628 ATG5Q9H1Y0 275 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 CHMP1AQ9HD42 196 aaPredicted RBP6.92□□□□□ -1.3
SSBP4-208ENST00000600628 VCX3AQ9NNX9 186 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 RDH8Q9NYR8 311 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 ZNF107Q9UII5 783 aaPredicted RBP6.92□□□□□ -1.3
SSBP4-208ENST00000600628 XRCC3O43542 346 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 IGLV2-14P01704 120 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 CNTFRP26992 372 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 ACTBP60709 375 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 NCS1P62166 190 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 SSBP2P81877 361 aaPredicted RBP6.91□□□□□ -1.3
SSBP4-208ENST00000600628 HES1Q14469 280 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 KPRPQ5T749 579 aaPredicted RBP6.91□□□□□ -1.3
SSBP4-208ENST00000600628 STPG2Q8N412 459 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 CHPT1Q8WUD6 406 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 MAFIPQ8WZ33 124 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 KCTD12Q96CX2 325 aaKnown RBP6.91□□□□□ -1.3
SSBP4-208ENST00000600628 CMTM3Q96MX0 182 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 HSPB9Q9BQS6 159 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 AUNIPQ9H7T9 357 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 DNAH9Q9NYC9 4486 aa6.91□□□□□ -1.3
SSBP4-208ENST00000600628 COL7A1Q02388 2944 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 HSPA12AO43301 675 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 RBBP9O75884 186 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 IGHG4P01861 327 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 HLA-DQB1P01920 261 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 IGKV1-16P04430 117 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 NAT1P18440 290 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 PPIFP30405 207 aaKnown RBP6.9□□□□□ -1.3
SSBP4-208ENST00000600628 MC5RP33032 325 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 LINC00205P59089 165 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 KIAA0141Q14154 515 aaPredicted RBP6.9□□□□□ -1.3
SSBP4-208ENST00000600628 C5orf64Q2M2E5 130 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 MRGPRG-AS1Q2M3A8 158 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 NSUN5P1Q3KNT7 163 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 C9orf152Q5JTZ5 239 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 IDNKQ5T6J7 187 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 CNIH2Q6PI25 160 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 FAM131AQ6UXB0 335 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 SLC35E3Q7Z769 313 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 COMMD1Q8N668 190 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 OR10J5Q8NHC4 309 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 SETD6Q8TBK2 473 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 NUDCD2Q8WVJ2 157 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 SNAPC3Q92966 411 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 PHF21AQ96BD5 680 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 NOL4LQ96MY1 436 aaPredicted RBP6.9□□□□□ -1.3
SSBP4-208ENST00000600628 OR4F4Q96R69 305 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 NAA50Q9GZZ1 169 aaKnown RBP6.9□□□□□ -1.3
SSBP4-208ENST00000600628 SDHAF2Q9NX18 166 aa6.9□□□□□ -1.3
SSBP4-208ENST00000600628 A0A075B6Q4 140 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 IGHV7-81A0A0B4J1V7 117 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 AP4M1O00189 453 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 NBR2O15453 112 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 SPDEFO95238 335 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 IGLV1-40P01703 118 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 CRYGBP07316 175 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 CTXN2P0C2S0 81 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 EGR2P11161 476 aaPredicted RBP6.89□□□□□ -1.31
SSBP4-208ENST00000600628 PSMB8P28062 276 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 SOX6P35712 828 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 BRWD1-AS2P59051 145 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 VBP1P61758 197 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 NDPQ00604 133 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 ARFRP1Q13795 201 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 MSMO1Q15800 293 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 UBE2NLQ5JXB2 153 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 SAMD5Q5TGI4 173 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 ZNF660Q6AZW8 331 aaPredicted RBP6.89□□□□□ -1.31
SSBP4-208ENST00000600628 GLDNQ6ZMI3 551 aaPredicted RBP6.89□□□□□ -1.31
SSBP4-208ENST00000600628 ETV3LQ6ZN32 361 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 OVCH2Q7RTZ1 564 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 HOGA1Q86XE5 327 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 MINDY2Q8NBR6 621 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 R3HDM4Q96D70 268 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 MRPS26Q9BYN8 205 aaKnown RBP6.89□□□□□ -1.31
SSBP4-208ENST00000600628 ANXA10Q9UJ72 324 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 RNF150Q9ULK6 438 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 WASHC3Q9Y3C0 194 aa6.89□□□□□ -1.31
SSBP4-208ENST00000600628 TSSC4Q9Y5U2 329 aaPredicted RBP6.89□□□□□ -1.31
SSBP4-208ENST00000600628 TRAV18A0A075B6X5 111 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 IGKV1D-13A0A0B4J2D9 117 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 TCRBV4S1A1TA0A5B7 111 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 PSMB11A5LHX3 300 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 NCBP2LA6PVI3 153 aaKnown RBP6.88□□□□□ -1.31
SSBP4-208ENST00000600628 LINC00473A8K010 186 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 FCN1O00602 326 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 RRHO14718 337 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 BET1O15155 118 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 APOA1P02647 267 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 OR8U9P0C7N5 309 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 IGKV1-13P0DP09 117 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 SLC6A1P30531 599 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 DUTP33316 252 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms