RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 DIRAS2Q96HU8 199 aa10.41□□□□□ -0.74
SRRM1-223ENST00000600523 EAF1Q96JC9 268 aaPredicted RBP10.41□□□□□ -0.74
SRRM1-223ENST00000600523 NABP2Q9BQ15 211 aa10.41□□□□□ -0.74
SRRM1-223ENST00000600523 ZNF251Q9BRH9 671 aa10.41□□□□□ -0.74
SRRM1-223ENST00000600523 MRPL20Q9BYC9 149 aaKnown RBP10.41□□□□□ -0.74
SRRM1-223ENST00000600523 KIAA1456Q9P272 454 aa10.41□□□□□ -0.74
SRRM1-223ENST00000600523 WASHC3Q9Y3C0 194 aa10.41□□□□□ -0.74
SRRM1-223ENST00000600523 OR2W1Q9Y3N9 320 aa10.41□□□□□ -0.74
SRRM1-223ENST00000600523 MEIS3P1A6NDR6 274 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 M0R1X1 148 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 RBBP9O75884 186 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 OR5H8P0DN80 308 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 PTHLHP12272 177 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 NFYAP23511 347 aaPredicted RBP10.4□□□□□ -0.74
SRRM1-223ENST00000600523 RCVRNP35243 200 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 VDAC2P45880 294 aaPredicted RBP10.4□□□□□ -0.74
SRRM1-223ENST00000600523 ACTBP60709 375 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 HERV-K104P61576 105 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 MRPS10P82664 201 aaKnown RBP10.4□□□□□ -0.74
SRRM1-223ENST00000600523 CDK10Q15131 360 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 RTL8BQ17RB0 113 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 ABCA11PQ4W5N1 156 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 RPL39P5Q59GN2 51 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 GVQW1Q8N7I0 195 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 FCAMRQ8WWV6 532 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 RASL11BQ9BPW5 248 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 ZNF747Q9BV97 191 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 PARP12Q9H0J9 701 aaKnown RBP10.4□□□□□ -0.74
SRRM1-223ENST00000600523 GAB2Q9UQC2 676 aa10.4□□□□□ -0.74
SRRM1-223ENST00000600523 FBN1P35555 2871 aaKnown RBP10.4□□□□□ -0.74
SRRM1-223ENST00000600523 HLA-DQB1P01920 261 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 FCER2P06734 321 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 RRASP10301 218 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 FCGR2CP31995 323 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 THBS3P49746 956 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 MMDQ15546 238 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 ACTBL2Q562R1 376 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 LAX1Q8IWV1 398 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 ZNF645Q8N7E2 425 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 GPX8Q8TED1 209 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 TAF15Q92804 592 aaKnown RBP eCLIP10.39□□□□□ -0.75
SRRM1-223ENST00000600523 DCUN1D5Q9BTE7 237 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 EHFQ9NZC4 300 aa10.39□□□□□ -0.75
SRRM1-223ENST00000600523 J3QRK9 145 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 CTDSP2O14595 271 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 KCNAB3O43448 404 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 IFNA6P05013 189 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 CT45A6P0DMU7 189 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 CT45A5P0DMU8 189 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 CT45A7P0DMV0 189 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 VSIG10L2P0DP72 767 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 TSPAN5P62079 268 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 BLCAPP62952 87 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 IL18Q14116 193 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 PLGLAQ15195 96 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 PYHIN1Q6K0P9 492 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 FAM131AQ6UXB0 335 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 PDPNQ86YL7 162 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 FOXRED2Q8IWF2 684 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 Q8N2B8 174 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 OR6F1Q8NGZ6 308 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 DGCR14Q96DF8 476 aaKnown RBP10.38□□□□□ -0.75
SRRM1-223ENST00000600523 TSNAXQ99598 290 aaKnown RBP10.38□□□□□ -0.75
SRRM1-223ENST00000600523 RNF5Q99942 180 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 GON7Q9BXV9 100 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 SLIRPQ9GZT3 109 aaKnown RBP10.38□□□□□ -0.75
SRRM1-223ENST00000600523 MMP27Q9H306 513 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 ZNF702PQ9H963 129 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 LIN7CQ9NUP9 197 aaKnown RBP10.38□□□□□ -0.75
SRRM1-223ENST00000600523 SDHAF2Q9NX18 166 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 PRELID3BQ9Y3B1 194 aa10.38□□□□□ -0.75
SRRM1-223ENST00000600523 ZNF736B4DX44 427 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-223ENST00000600523 H0YJW9 148 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 NAT1P18440 290 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 HLA-DMAP28067 261 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 S100GP29377 79 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 SSBP1Q04837 148 aaKnown RBP10.37□□□□□ -0.75
SRRM1-223ENST00000600523 TMEM17Q86X19 198 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 C5orf56Q8N8D9 126 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 DRAXINQ8NBI3 349 aaPredicted RBP10.37□□□□□ -0.75
SRRM1-223ENST00000600523 ZBTB34Q8NCN2 500 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 OR5AN1Q8NGI8 311 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 SECTM1Q8WVN6 248 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 GIMAP1Q8WWP7 306 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 SNAPC3Q92966 411 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
SRRM1-223ENST00000600523 RBM38Q9H0Z9 239 aaKnown RBP10.37□□□□□ -0.75
SRRM1-223ENST00000600523 SLC35D1Q9NTN3 355 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 A3GALT2U3KPV4 340 aa10.37□□□□□ -0.75
SRRM1-223ENST00000600523 FABP12A6NFH5 140 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 GABARAPH6UMI1 98 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 NBR2O15453 112 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 TUSC2O75896 110 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 PPYP01298 95 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 PMP2P02689 132 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 TBPP20226 339 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 AADACP22760 399 aa10.36□□□□□ -0.75
SRRM1-223ENST00000600523 PROK1P58294 105 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms