RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 GPR146Q96CH1 333 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 ARPC5LQ9BPX5 153 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 UBTD1Q9HAC8 227 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 IDI2-AS1Q9NZ38 188 aa12.52□□□□□ -0.41
HIF3A-218ENST00000600383 NDUFA2O43678 99 aa12.51□□□□□ -0.41
HIF3A-218ENST00000600383 KRASP01116 189 aa12.51□□□□□ -0.41
HIF3A-218ENST00000600383 RPL12P30050 165 aaKnown RBP12.51□□□□□ -0.41
HIF3A-218ENST00000600383 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
HIF3A-218ENST00000600383 CT45A1Q5HYN5 189 aa12.51□□□□□ -0.41
HIF3A-218ENST00000600383 CLEC9AQ6UXN8 241 aa12.51□□□□□ -0.41
HIF3A-218ENST00000600383 CT45A3Q8NHU0 189 aa12.51□□□□□ -0.41
HIF3A-218ENST00000600383 RCL1Q9Y2P8 373 aaKnown RBP12.51□□□□□ -0.41
HIF3A-218ENST00000600383 FLNCQ14315 2725 aa12.51□□□□□ -0.41
HIF3A-218ENST00000600383 E5RGE8 158 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 PROP1O75360 226 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 WNT2P09544 360 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 DANCRP0C864 163 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 HKR1P10072 659 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 MEF2CQ06413 473 aaPredicted RBP12.5□□□□□ -0.41
HIF3A-218ENST00000600383 EIF4EBP1Q13541 118 aaPredicted RBP12.5□□□□□ -0.41
HIF3A-218ENST00000600383 ZNF714Q96N38 554 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 HSD17B10Q99714 261 aaKnown RBP12.5□□□□□ -0.41
HIF3A-218ENST00000600383 ABHD14AQ9BUJ0 271 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 ZFP57Q9NU63 452 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 NSG2Q9Y328 171 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 AKAP6Q13023 2319 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 M0R1X1 148 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 IGKV1-5P01602 117 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 CDKN1AP38936 164 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 BRWD1-AS2P59051 145 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 ESCO2Q56NI9 601 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 C11orf71Q6IPW1 123 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 Q6ZRM9 215 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 ST8SIA2Q92186 375 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 IFI27L2Q9H2X8 130 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 GAL3ST2Q9H3Q3 398 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 KAAG1Q9UBP8 84 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 POMT1Q9Y6A1 747 aa12.5□□□□□ -0.41
HIF3A-218ENST00000600383 MYO18BQ8IUG5 2567 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 PPIHO43447 177 aaKnown RBP12.49□□□□□ -0.41
HIF3A-218ENST00000600383 SSSCA1O60232 199 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 DAOP14920 347 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 G6PCP35575 357 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 RAB14P61106 215 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 NCR3LG1Q68D85 454 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 ZNF66Q6ZN08 573 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 TAS2R3Q9NYW6 316 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 CACNG5Q9UF02 275 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 S1PR2O95136 353 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 DUTP33316 252 aaKnown RBP12.49□□□□□ -0.41
HIF3A-218ENST00000600383 RAB7AP51149 207 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 C1orf229Q6ZS94 237 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-218ENST00000600383 SMIM3Q9BZL3 60 aa12.49□□□□□ -0.41
HIF3A-218ENST00000600383 A0A1B0GU03 582 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 CLEC18AA5D8T8 446 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 WRBO00258 174 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 FCGR3BO75015 233 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 MSMO1Q15800 293 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 CLEC18CQ8NCF0 446 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 LSM10Q969L4 123 aaKnown RBP12.48□□□□□ -0.41
HIF3A-218ENST00000600383 GSX2Q9BZM3 304 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 ZNRD1Q9P1U0 126 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 RPUSD1Q9UJJ7 312 aaKnown RBP12.48□□□□□ -0.41
HIF3A-218ENST00000600383 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 ZNF462Q96JM2 2506 aa12.48□□□□□ -0.41
HIF3A-218ENST00000600383 CAV2P51636 162 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 TMEM33P57088 247 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
HIF3A-218ENST00000600383 ID3Q02535 119 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 DTX2Q86UW9 622 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 NEU4Q8WWR8 484 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-218ENST00000600383 NARFLQ9H6Q4 476 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 PLEKHA2Q9HB19 425 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 A6NNC1 897 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 RAB29O14966 203 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 CHST1O43916 411 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 NDUFS7O75251 213 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 IGHV2-70P01814 119 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-218ENST00000600383 PVALBP20472 110 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-218ENST00000600383 VAMP2P63027 116 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 MRPS11P82912 194 aaKnown RBP12.47□□□□□ -0.41
HIF3A-218ENST00000600383 SCARB1Q8WTV0 552 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 MALRD1Q5VYJ5 2156 aa12.47□□□□□ -0.41
HIF3A-218ENST00000600383 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.41
HIF3A-218ENST00000600383 IGFBP2P18065 325 aa12.46□□□□□ -0.41
HIF3A-218ENST00000600383 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
HIF3A-218ENST00000600383 HEPN1Q6WQI6 88 aa12.46□□□□□ -0.41
HIF3A-218ENST00000600383 RBMXL1Q96E39 390 aaKnown RBP12.46□□□□□ -0.41
HIF3A-218ENST00000600383 TIMD4Q96H15 378 aa12.46□□□□□ -0.41
HIF3A-218ENST00000600383 CYTL1Q9NRR1 136 aa12.46□□□□□ -0.41
HIF3A-218ENST00000600383 USP9XQ93008 2570 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-218ENST00000600383 PITX3O75364 302 aa12.46□□□□□ -0.42
HIF3A-218ENST00000600383 RNF224P0DH78 156 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms