RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 NABP2Q9BQ15 211 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 HRASLSQ9HDD0 168 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 ESM1Q9NQ30 184 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 CCL28Q9NRJ3 127 aa16.11■□□□□ 0.17
SHKBP1-222ENST00000600320 IGHV3-72A0A0B4J1Y9 119 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 TIMM23O14925 209 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 HOXA3O43365 443 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 IGHV4-59P01825 116 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 CD40LGP29965 261 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 MEF2DQ14814 521 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 LRRC75BQ2VPJ9 315 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF57Q68EA5 555 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 FAM71F2Q6NXP2 309 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 MOB3BQ86TA1 216 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 OR8H3Q8N146 312 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 ARRDC1Q8N5I2 433 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 DRAM1Q8N682 238 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 CCDC32Q9BV29 185 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 SLC5A7Q9GZV3 580 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 GHITMQ9H3K2 345 aa16.1■□□□□ 0.17
SHKBP1-222ENST00000600320 LINC00854A0A1B0GVQ3 168 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 VGLL3A8MV65 326 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 M0R1X1 148 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 CT45A6P0DMU7 189 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 CT45A5P0DMU8 189 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 CT45A7P0DMV0 189 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 CD24P25063 80 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 IER3P46695 156 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 CCDC144NLQ6NUI1 221 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 GLDNQ6ZMI3 551 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF645Q8N7E2 425 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 DRAXINQ8NBI3 349 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 ZNF418Q8TF45 676 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 MRGPRFQ96AM1 343 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 DUX5Q96PT3 197 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 S1PR3Q99500 378 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 TNFRSF19Q9NS68 423 aa16.09■□□□□ 0.17
SHKBP1-222ENST00000600320 DISC1C4P0D8 188 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 H3BUX3 64 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 INPP1P49441 399 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 DYNLT3P51808 116 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 AP3S2P59780 193 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 BAMBIQ13145 260 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 AANATQ16613 207 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 SCGB2B2Q4G0G5 96 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 RBMS3Q6XE24 437 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 ZDHHC22Q8N966 263 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 OR51S1Q8NGJ8 323 aa16.08■□□□□ 0.16
SHKBP1-222ENST00000600320 DNAJC9-AS1A6NH13 148 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 TXNL1O43396 289 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 VENTXO95231 258 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 GNRHRP30968 328 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 HILS1P60008 231 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 EIF4EBP1Q13541 118 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 HABP2Q14520 560 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 SLC9A3R2Q15599 337 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 ZNF383Q8NA42 475 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 OR13C8Q8NGS7 320 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 GPHA2Q96T91 129 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 ABCB10Q9NRK6 738 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 MCUBQ9NWR8 336 aa16.07■□□□□ 0.16
SHKBP1-222ENST00000600320 FAM90A9PA6NNJ1 464 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 PLA2G10O15496 165 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 SRSF2Q01130 221 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 IFITM3Q01628 133 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 LY6EQ16553 131 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 ZNF818PQ6ZRF7 136 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 TERB2Q8NHR7 220 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 SSMEM1Q8WWF3 244 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 CAPSLQ8WWF8 208 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 SLC2A8Q9NY64 477 aa16.06■□□□□ 0.16
SHKBP1-222ENST00000600320 UPK1BO75841 260 aa16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 SLC22A5O76082 557 aa16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 SNRNP70P08621 437 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 BRS3P32247 399 aa16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 DUTP33316 252 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 FAUP35544 74 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 UCP3P55916 312 aa16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 RPL30P62888 115 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 MSMO1Q15800 293 aa16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 CCBE1Q6UXH8 406 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 TCF19Q9Y242 345 aa16.05■□□□□ 0.16
SHKBP1-222ENST00000600320 A6NDX4 124 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 LINC00473A8K010 186 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 H0YJW9 148 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 TNFSF12O43508 249 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 TCF21O43680 179 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 IGKV1D-33P01593 117 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 IGKV1-33P01594 117 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 PGAM2P15259 253 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 CD1BP29016 333 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 ARHGDIBP52566 201 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 IDO2Q6ZQW0 420 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 TMEM86BQ8N661 226 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 OR5AN1Q8NGI8 311 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 MARCH1Q8TCQ1 289 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 DEDD2Q8WXF8 326 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 AKR1E2Q96JD6 320 aa16.04■□□□□ 0.16
SHKBP1-222ENST00000600320 PRRT1Q99946 306 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms