RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 MRPS7Q9Y2R9 242 aaKnown RBP12.28□□□□□ -0.44
XRCC1-206ENST00000597811 IGKV1D-8A0A087WSZ0 117 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 MEIS3P1A6NDR6 274 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 CCDC160A6NGH7 325 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 XRCC3O43542 346 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 SSX5O60225 188 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 CTXN2P0C2S0 81 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 EBI3Q14213 229 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 MMDQ15546 238 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 PDLIM3Q53GG5 364 aaPredicted RBP12.27□□□□□ -0.45
XRCC1-206ENST00000597811 FAM71F2Q6NXP2 309 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 GLDNQ6ZMI3 551 aaPredicted RBP12.27□□□□□ -0.45
XRCC1-206ENST00000597811 C5orf56Q8N8D9 126 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 DRAXINQ8NBI3 349 aaPredicted RBP12.27□□□□□ -0.45
XRCC1-206ENST00000597811 BEST4Q8NFU0 473 aa12.27□□□□□ -0.45
XRCC1-206ENST00000597811 M0R1X1 148 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 FGF16O43320 207 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 HPGDSO60760 199 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 EIF4EP06730 217 aaKnown RBP12.26□□□□□ -0.45
XRCC1-206ENST00000597811 ZNF182P17025 639 aaPredicted RBP12.26□□□□□ -0.45
XRCC1-206ENST00000597811 CBX5P45973 191 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 TAS2R20P59543 309 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 CNIH2Q6PI25 160 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 FAM131AQ6UXB0 335 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 Q6ZS49 121 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 RAB2BQ8WUD1 216 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 AGMATQ9BSE5 352 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 ANXA10Q9UJ72 324 aa12.26□□□□□ -0.45
XRCC1-206ENST00000597811 RGS5O15539 181 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 DIRAS3O95661 229 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 AMY1AP04745 511 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 AMY2AP04746 511 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 CT45A6P0DMU7 189 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 CT45A5P0DMU8 189 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 CT45A7P0DMV0 189 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 NFYAP23511 347 aaPredicted RBP12.25□□□□□ -0.45
XRCC1-206ENST00000597811 MC5RP33032 325 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 ACTBP60709 375 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 SPCS2Q15005 226 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 PLGLAQ15195 96 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 SLC35E3Q7Z769 313 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 OR8H1Q8NGG4 311 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 WIPF2Q8TF74 440 aaPredicted RBP12.25□□□□□ -0.45
XRCC1-206ENST00000597811 KIAA1456Q9P272 454 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 DNAH3Q8TD57 4116 aa12.25□□□□□ -0.45
XRCC1-206ENST00000597811 OR5H14A6NHG9 310 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 FBXO24O75426 580 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 APOA1P02647 267 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 APOA2P02652 100 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 CD28P10747 220 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 PRSS3P35030 304 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 LUMP51884 338 aaPredicted RBP12.24□□□□□ -0.45
XRCC1-206ENST00000597811 TMBIM6P55061 237 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 F2RL1P55085 397 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 SNX29P2Q8IUI4 249 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 FOXRED2Q8IWF2 684 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 H1FOOQ8IZA3 346 aaPredicted RBP12.24□□□□□ -0.45
XRCC1-206ENST00000597811 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 LIN7CQ9NUP9 197 aaKnown RBP12.24□□□□□ -0.45
XRCC1-206ENST00000597811 NECAP2Q9NVZ3 263 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 WASHC3Q9Y3C0 194 aa12.24□□□□□ -0.45
XRCC1-206ENST00000597811 ELK1P19419 428 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 CBX3Q13185 183 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 Q8N6K4 173 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 Q8N9W7 124 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.23□□□□□ -0.45
XRCC1-206ENST00000597811 OR5AU1Q8NGC0 362 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 TOLLIPQ9H0E2 274 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 SDHAF2Q9NX18 166 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 LINC00527Q9UJ94 153 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 OR2W1Q9Y3N9 320 aa12.23□□□□□ -0.45
XRCC1-206ENST00000597811 H0YJW9 148 aa12.22□□□□□ -0.45
XRCC1-206ENST00000597811 NBR2O15453 112 aa12.22□□□□□ -0.45
XRCC1-206ENST00000597811 CNTFRP26992 372 aa12.22□□□□□ -0.45
XRCC1-206ENST00000597811 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
XRCC1-206ENST00000597811 NSUN5P1Q3KNT7 163 aa12.22□□□□□ -0.45
XRCC1-206ENST00000597811 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
XRCC1-206ENST00000597811 RITA1Q96K30 269 aa12.22□□□□□ -0.45
XRCC1-206ENST00000597811 NOL4LQ96MY1 436 aaPredicted RBP12.22□□□□□ -0.45
XRCC1-206ENST00000597811 SLC35D1Q9NTN3 355 aa12.22□□□□□ -0.45
XRCC1-206ENST00000597811 PSMB11A5LHX3 300 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 TUSC2O75896 110 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 OPN1MWP04001 364 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 OPN1MW2P0DN77 364 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 OPN1MW3P0DN78 364 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 OR5H8P0DN80 308 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 FCGR2CP31995 323 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 LINC00205P59089 165 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 SLC35B1P78383 322 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 RNASE12Q5GAN4 147 aaKnown RBP12.21□□□□□ -0.45
XRCC1-206ENST00000597811 ZNF383Q8NA42 475 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 ISOC1Q96CN7 298 aa12.21□□□□□ -0.45
XRCC1-206ENST00000597811 CITED2Q99967 270 aaPredicted RBP12.21□□□□□ -0.45
XRCC1-206ENST00000597811 BCL7BQ9BQE9 202 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms