RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 CPEP16870 476 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 ATF4P18848 351 aaPredicted RBP7.61□□□□□ -1.19
TRIM28-210ENST00000597618 FUT3P21217 361 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 FASP25445 335 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 SNRPGP62308 76 aaKnown RBP7.61□□□□□ -1.19
TRIM28-210ENST00000597618 DEFA5Q01523 94 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 HMGN3Q15651 99 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 DEFB114Q30KQ6 69 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 IL1F10Q8WWZ1 152 aa7.61□□□□□ -1.19
TRIM28-210ENST00000597618 TECRQ9NZ01 308 aaKnown RBP7.61□□□□□ -1.19
TRIM28-210ENST00000597618 DNAH2Q9P225 4427 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 LOC102724200A0A096LPH7 203 aaPredicted RBP7.6□□□□□ -1.19
TRIM28-210ENST00000597618 H3BNX3 289 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 IGKV1-16P04430 117 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 SNRPBP14678 240 aaKnown RBP7.6□□□□□ -1.19
TRIM28-210ENST00000597618 GNGT1P63211 74 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 EWSR1Q01844 656 aaKnown RBP eCLIP7.6□□□□□ -1.19
TRIM28-210ENST00000597618 DNAL1Q4LDG9 190 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 GLIPR1L1Q6UWM5 242 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 C5orf24Q7Z6I8 188 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 LYG2Q86SG7 212 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 PDPNQ86YL7 162 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 TMEM217Q8N7C4 229 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 MUL1Q969V5 352 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 SULT4A1Q9BR01 284 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 SELENOIQ9C0D9 397 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 ERVK13-1Q9NX77 482 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 COA4Q9NYJ1 87 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 CKLFQ9UBR5 152 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 TP53TG1Q9Y2A0 90 aa7.6□□□□□ -1.19
TRIM28-210ENST00000597618 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 BMPR1BO00238 502 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 GYG2O15488 501 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 PDCD6O75340 191 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 CRTAPO75718 401 aaPredicted RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 APOA2P02652 100 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 MGMTP16455 207 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 IGFBP3P17936 291 aaPredicted RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 BMI1P35226 326 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 CAPGP40121 348 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 KIR2DS2P43631 304 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 GTF2A1P52655 376 aaPredicted RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 GYS2P54840 703 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 RPS16P62249 146 aaKnown RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 SSBP2P81877 361 aaPredicted RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 CCDC58Q4VC31 144 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 AWAT2Q6E213 333 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 SIGIRRQ6IA17 410 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 RPL22L1Q6P5R6 122 aaKnown RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 JAGN1Q8N5M9 183 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 THRSPQ92748 146 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 WDR89Q96FK6 387 aaPredicted RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 ABHD14BQ96IU4 210 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 Q96M66 194 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 OR14A2Q96R54 314 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 PARP12Q9H0J9 701 aaKnown RBP7.59□□□□□ -1.19
TRIM28-210ENST00000597618 BANF2Q9H503 90 aa7.59□□□□□ -1.19
TRIM28-210ENST00000597618 MSGN1A6NI15 193 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 C2orf70A6NJV1 201 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 FAM223BA6NKX1 122 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 ITGB1BP1O14713 200 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 TUSC2O75896 110 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 BAG2O95816 211 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 FCGR1AP12314 374 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 FOLR2P14207 255 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 EXOSC2Q13868 293 aaKnown RBP7.58□□□□□ -1.2
TRIM28-210ENST00000597618 FAM209BQ5JX69 171 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 Q6ZWC4 215 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 AMIGO2Q86SJ2 522 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 FAM223AQ8IWN6 122 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 DRAXINQ8NBI3 349 aaPredicted RBP7.58□□□□□ -1.2
TRIM28-210ENST00000597618 OR52B4Q8NGK2 314 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 EDARADDQ8WWZ3 215 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 PHB2Q99623 299 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 AGMATQ9BSE5 352 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 OAZ3Q9UMX2 235 aa7.58□□□□□ -1.2
TRIM28-210ENST00000597618 SPRY2O43597 315 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 RBMXL2O75526 392 aaKnown RBP7.57□□□□□ -1.2
TRIM28-210ENST00000597618 OR9G9P0C7N8 305 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 MAP2K4P45985 399 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 APOC4P55056 127 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 RHOGP84095 191 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 PJVKQ0ZLH3 352 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 ANKRD55Q3KP44 614 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 MOB1BQ7L9L4 216 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 CDH26Q8IXH8 852 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 SVOPQ8N4V2 548 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 ZNF383Q8NA42 475 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 ADAD2Q8NCV1 583 aaKnown RBP7.57□□□□□ -1.2
TRIM28-210ENST00000597618 PHLDA1Q8WV24 401 aaPredicted RBP7.57□□□□□ -1.2
TRIM28-210ENST00000597618 ORAI1Q96D31 301 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 CYYR1Q96J86 154 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 ZNF230Q9UIE0 474 aaPredicted RBP7.57□□□□□ -1.2
TRIM28-210ENST00000597618 AP4S1Q9Y587 144 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 ORC6Q9Y5N6 252 aa7.57□□□□□ -1.2
TRIM28-210ENST00000597618 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.56□□□□□ -1.2
TRIM28-210ENST00000597618 IGLV2-23P01705 113 aa7.56□□□□□ -1.2
TRIM28-210ENST00000597618 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms