RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 GNG12Q9UBI6 72 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 V9GY05 133 aa10.55□□□□□ -0.72
SHKBP1-208ENST00000595726 IGHV4OR15-8A0A075B7B6 117 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 A0A087WW49 117 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 TRAV1-2A0A0B4J238 106 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 TRDV1A0A1B0GX56 115 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 FOXI3A8MTJ6 420 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 SOCS1O15524 211 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 NAPSAO96009 420 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 GALP22466 123 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 SOX6P35712 828 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF134P52741 427 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF137PP52743 207 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 OR10A3P58181 314 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 GNMTQ14749 295 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 HMGN3Q15651 99 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 FAM89BQ8N5H3 189 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 RTN4IP1Q8WWV3 396 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 FCGR1BQ92637 280 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 NABP2Q9BQ15 211 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 URM1Q9BTM9 101 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 OR51J1Q9H342 316 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 KCNIP1Q9NZI2 227 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 JPT1Q9UK76 154 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 LRRC42Q9Y546 428 aa10.54□□□□□ -0.72
SHKBP1-208ENST00000595726 LINC01619G3V211 115 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 PDCD5O14737 125 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 HSPA12AO43301 675 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 IGLV1-40P01703 118 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 GAPDHP04406 335 aaKnown RBP10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 OR8U9P0C7N5 309 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 SLC2A2P11168 524 aaPredicted RBP10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 MYL9P24844 172 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 IL3RAP26951 378 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 PSMB9P28065 219 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 RAB9AP51151 201 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 PSMD7P51665 324 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 HTD2P86397 168 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 MORN2Q502X0 79 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 CT45A1Q5HYN5 189 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 HES5Q5TA89 166 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 C22orf42Q6IC83 251 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 ZNF773Q6PK81 442 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 IZUMO1Q8IYV9 350 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 OR52L2PQ8NGH6 319 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 CT45A3Q8NHU0 189 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 CASTOR1Q8WTX7 329 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 GATAD1Q8WUU5 269 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 HIPK2Q9H2X6 1198 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 TUBA4BQ9H853 241 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 OR2S2Q9NQN1 319 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 PLEKHJ1Q9NW61 149 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 STEAP1Q9UHE8 339 aa10.53□□□□□ -0.72
SHKBP1-208ENST00000595726 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 BRI3O95415 125 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 PPP1CCP36873 323 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 TMEM50BP56557 158 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 PITPNAQ00169 270 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 PLA2G7Q13093 441 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 C2orf76Q3KRA6 126 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 STEAP3Q658P3 488 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 MOB1BQ7L9L4 216 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 NR2C2APQ86WQ0 139 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 HDHD3Q9BSH5 251 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 ABHD14AQ9BUJ0 271 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 RSRP1Q9BUV0 290 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 ZNF107Q9UII5 783 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 AK3Q9UIJ7 227 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 HSF4Q9ULV5 492 aa10.52□□□□□ -0.73
SHKBP1-208ENST00000595726 TRBV6-6A0A0A6YYG2 114 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 IFITM5A6NNB3 132 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 TXNL1O43396 289 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 YPEL1O60688 119 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 MOSP00540 346 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 IGLV1-51P01701 117 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 OR5H8P0DN80 308 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 RAB3BP20337 219 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 RANBP1P43487 201 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 GALMQ96C23 342 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 ARHGAP5-AS1Q96IT6 56 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 YPEL2Q96QA6 119 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 PECRQ9BY49 303 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 TOLLIPQ9H0E2 274 aa10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 TXNL4BQ9NX01 149 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-208ENST00000595726 ATP6V0E1O15342 81 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 CD1BP29016 333 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 FGF9P31371 208 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 KCTD21Q4G0X4 260 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 PLAC9Q5JTB6 97 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 ANKRD13BQ86YJ7 626 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 ODF3L1Q8IXM7 274 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 OR56B1Q8NGI3 324 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 IL1F10Q8WWZ1 152 aa10.5□□□□□ -0.73
SHKBP1-208ENST00000595726 ST6GALNAC5Q9BVH7 336 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms