RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 FOXI3A8MTJ6 420 aaPredicted RBP13.2□□□□□ -0.3
CCDC9-202ENST00000595659 RGS10O43665 173 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 EGR2P11161 476 aaPredicted RBP13.2□□□□□ -0.3
CCDC9-202ENST00000595659 ZBTB25P24278 435 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
CCDC9-202ENST00000595659 SLURP1P55000 103 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 RUNX1Q01196 453 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 C2orf76Q3KRA6 126 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 ZNF660Q6AZW8 331 aaPredicted RBP13.2□□□□□ -0.3
CCDC9-202ENST00000595659 MS4A10Q96PG2 267 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 PECRQ9BY49 303 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 DUSP21Q9H596 190 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 Q9N2K0 584 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 FOXA2Q9Y261 457 aaPredicted RBP13.2□□□□□ -0.3
CCDC9-202ENST00000595659 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
CCDC9-202ENST00000595659 WASHC3Q9Y3C0 194 aa13.2□□□□□ -0.3
CCDC9-202ENST00000595659 TRBV6-6A0A0A6YYG2 114 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 IGKV1-6A0A0C4DH72 117 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 OVOL1O14753 267 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 PROP1O75360 226 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 MC5RP33032 325 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 FABP5Q01469 135 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 PSG5Q15238 335 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 PLAC9Q5JTB6 97 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 HES5Q5TA89 166 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 PPP1R27Q86WC6 154 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 DLX4Q92988 240 aaPredicted RBP13.19□□□□□ -0.3
CCDC9-202ENST00000595659 FAM3DQ96BQ1 224 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 CMSS1Q9BQ75 279 aaKnown RBP13.19□□□□□ -0.3
CCDC9-202ENST00000595659 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 METTL1Q9UBP6 276 aaKnown RBP13.19□□□□□ -0.3
CCDC9-202ENST00000595659 U3KQK5 164 aa13.19□□□□□ -0.3
CCDC9-202ENST00000595659 IGHV4OR15-8A0A075B7B6 117 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 A0A087WW49 117 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 ITGB1BP1O14713 200 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 ARL6IP5O75915 188 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 IGHV3-11P01762 117 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 CD3GP09693 182 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 CPEP16870 476 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 UNQ5815/PRO19632Q6UWF5 114 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 ZNF383Q8NA42 475 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 OR5AN1Q8NGI8 311 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 EDARADDQ8WWZ3 215 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 TOLLIPQ9H0E2 274 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 ZNF221Q9UK13 617 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 HSF4Q9ULV5 492 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 NUBP2Q9Y5Y2 271 aa13.18□□□□□ -0.3
CCDC9-202ENST00000595659 TMEM272A0A1B0GTI8 110 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
CCDC9-202ENST00000595659 CA2P00918 260 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 IGKV1-16P04430 117 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 NHLRC4P0CG21 123 aaPredicted RBP13.17□□□□□ -0.3
CCDC9-202ENST00000595659 RPS16P62249 146 aaKnown RBP13.17□□□□□ -0.3
CCDC9-202ENST00000595659 MLLT11Q13015 90 aaPredicted RBP13.17□□□□□ -0.3
CCDC9-202ENST00000595659 ACTBL2Q562R1 376 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 LFNGQ8NES3 379 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 MGLLQ99685 303 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 ISYNA1Q9NPH2 558 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 TPSG1Q9NRR2 321 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 RDH8Q9NYR8 311 aa13.17□□□□□ -0.3
CCDC9-202ENST00000595659 TRDCB7Z8K6 153 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 LINC01619G3V211 115 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 SAP30O75446 220 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 RBBP9O75884 186 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 CRHBPP24387 322 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 CRIP2P52943 208 aaPredicted RBP13.16□□□□□ -0.3
CCDC9-202ENST00000595659 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
CCDC9-202ENST00000595659 TRAM1Q15629 374 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 MOGAT2Q3SYC2 334 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 OR56B1Q8NGI3 324 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 PTX4Q96A99 478 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 MGAT4AQ9UM21 535 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 V9GY05 133 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 NBEAL2Q6ZNJ1 2754 aa13.16□□□□□ -0.3
CCDC9-202ENST00000595659 M0R1X1 148 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 SLC25A17O43808 307 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 TFAP2AP05549 437 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.3
CCDC9-202ENST00000595659 PSMA1P25786 263 aaKnown RBP13.15□□□□□ -0.3
CCDC9-202ENST00000595659 INSL3P51460 131 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 OR10A3P58181 314 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 TPPP2P59282 170 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 ZNF429Q86V71 674 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 GRPEL2Q8TAA5 225 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 MAFIPQ8WZ33 124 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 TSNAXQ99598 290 aaKnown RBP13.15□□□□□ -0.3
CCDC9-202ENST00000595659 RNF5Q99942 180 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 GHITMQ9H3K2 345 aa13.15□□□□□ -0.3
CCDC9-202ENST00000595659 A0A075B6Q4 140 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 ARPC1BO15143 372 aaKnown RBP13.14□□□□□ -0.31
CCDC9-202ENST00000595659 BET1O15155 118 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 LDLRAD4O15165 306 aa13.14□□□□□ -0.31
CCDC9-202ENST00000595659 OR8U9P0C7N5 309 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms