RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 GNRHRP30968 328 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 FMO3P31513 532 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 PPP1CCP36873 323 aaKnown RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 ALDH3B2P48448 385 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 OR2B8PP59922 312 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 TAGLNQ01995 201 aaKnown RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 PLA2G7Q13093 441 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 TRAM2Q15035 370 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CYP51A1Q16850 503 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 PAGE3Q5JUK9 113 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 C10orf55Q5SWW7 151 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 C6orf141Q5SZD1 244 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 IBA57Q5T440 356 aaKnown RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 UBE2UQ5VVX9 321 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 STEAP3Q658P3 488 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 FAM90A2PQ658T7 463 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ARHGAP24Q8N264 748 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 SLC35F6Q8N357 371 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 FAM86B1Q8N7N1 296 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CHST4Q8NCG5 386 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 OR4B1Q8NGF8 309 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 OR5D18Q8NGL1 313 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 OR14K1Q8NGZ2 314 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ACMSDQ8TDX5 336 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 THEM6Q8WUY1 208 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 UBLCP1Q8WVY7 318 aaPredicted RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 GNPNAT1Q96EK6 184 aaPredicted RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 BORCS8Q96FH0 119 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 CYYR1Q96J86 154 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 PRRC1Q96M27 445 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 TMEM68Q96MH6 324 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ZIM3Q96PE6 472 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 OR2A7Q96R45 310 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 NEU1Q99519 415 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 PAXXQ9BUH6 204 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ALG8Q9BVK2 526 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 IFT27Q9BW83 186 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 RHPN1-AS1Q9BWJ2 59 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 TTTY10Q9BZA0 68 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 ZNF436Q9C0F3 470 aaPredicted RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 POLR2J2Q9GZM3 115 aaKnown RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 POLR2J3Q9H1A7 115 aaKnown RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 MS4A6AQ9H2W1 248 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 OR52D1Q9H346 318 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 DAZ1Q9NQZ3 744 aaKnown RBP1.97□□□□□ -2.09
VRK3-204ENST00000593912 SNX12Q9UMY4 172 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 V9GYS6 101 aa1.97□□□□□ -2.09
VRK3-204ENST00000593912 TRBV5-3A0A0A0MS03 114 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 A0A1B0GTI1 187 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 TMEM269A0A1B0GVZ9 245 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 TLDC2A0PJX2 215 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 OR5H14A6NHG9 310 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 HMX3A6NHT5 357 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 DNASE2O00115 360 aaPredicted RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 MFNGO00587 321 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 ARPC3O15145 178 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 SELENOFO60613 162 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 CYB5AP00167 134 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 HBZP02008 142 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 TTRP02766 147 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 ATP5G1P05496 136 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 GNB3P16520 340 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 GPX2P18283 190 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 OMPP47874 163 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 ATP5G3P48201 142 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 RASSF2P50749 326 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 FUT6P51993 359 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 POLR2JP52435 117 aaKnown RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 MTPNP58546 118 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 RPL11P62913 178 aaKnown RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 OR5I1Q13606 314 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 ALKBH1Q13686 389 aaKnown RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 TNXAQ16473 311 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 Q3ZCU0 254 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 MORN2Q502X0 79 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 FAM98BQ52LJ0 330 aaKnown RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 LINC01590Q5TEZ4 76 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 OGFOD2Q6N063 350 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 PLET1Q6UQ28 207 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 MSANTD1Q6ZTZ1 278 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 TCF24Q7RTU0 167 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 OFCC1Q8IZS5 231 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 CADM3Q8N126 398 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 CBR4Q8N4T8 237 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 SLC37A3Q8NCC5 494 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 OR2T4Q8NH00 348 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 CNIH3Q8TBE1 160 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 RXFP4Q8TDU9 374 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 SRSF12Q8WXF0 261 aaKnown RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 EEF1AKMT3Q96AZ1 226 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 ZNF414Q96IQ9 312 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 CLUHP3Q96NS8 147 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 FANCD2OSQ96PS1 177 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 RAB40CQ96S21 281 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 INTS14Q96SY0 518 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 TSNAXQ99598 290 aaKnown RBP1.96□□□□□ -2.1
VRK3-204ENST00000593912 SULT4A1Q9BR01 284 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 FNDC11Q9BVV2 318 aa1.96□□□□□ -2.1
VRK3-204ENST00000593912 C20orf27Q9GZN8 174 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms