RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 A0A0A6YYD4 124 aa18.43■□□□□ 0.54
LSM4-202ENST00000593564 BPNT1O95861 308 aa18.43■□□□□ 0.54
LSM4-202ENST00000593564 HSPB1P04792 205 aaKnown RBP18.43■□□□□ 0.54
LSM4-202ENST00000593564 SRMP19623 302 aa18.43■□□□□ 0.54
LSM4-202ENST00000593564 CASC10Q5T4H9 136 aa18.43■□□□□ 0.54
LSM4-202ENST00000593564 ZNF562Q6V9R5 426 aa18.43■□□□□ 0.54
LSM4-202ENST00000593564 EDARADDQ8WWZ3 215 aa18.43■□□□□ 0.54
LSM4-202ENST00000593564 FLYWCH2Q96CP2 140 aaKnown RBP18.43■□□□□ 0.54
LSM4-202ENST00000593564 ARPC1BO15143 372 aaKnown RBP18.42■□□□□ 0.54
LSM4-202ENST00000593564 PSG5Q15238 335 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 HSD17B12Q53GQ0 312 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 UNQ5815/PRO19632Q6UWF5 114 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 OR6M1Q8NGM8 313 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 RHOVQ96L33 236 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 FAM103A1Q9BTL3 118 aaKnown RBP18.42■□□□□ 0.54
LSM4-202ENST00000593564 C11orf54Q9H0W9 315 aaPredicted RBP18.42■□□□□ 0.54
LSM4-202ENST00000593564 SLA2Q9H6Q3 261 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 OR1A1Q9P1Q5 309 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 METTL1Q9UBP6 276 aaKnown RBP18.42■□□□□ 0.54
LSM4-202ENST00000593564 MGAT4AQ9UM21 535 aa18.42■□□□□ 0.54
LSM4-202ENST00000593564 SPDEFO95238 335 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 IGHV3-11P01762 117 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 CDK1P06493 297 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 ZBTB25P24278 435 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 CD40LGP29965 261 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 CEACAM6P40199 344 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 HLA-DRB3P79483 266 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 PITPNAQ00169 270 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 RCN1Q15293 331 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 CEACAM19Q7Z692 300 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 LFNGQ8NES3 379 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 PTX4Q96A99 478 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 OR4C12Q96R67 309 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 CLCC1Q96S66 551 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 LPAR5Q9H1C0 372 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 AK3Q9UIJ7 227 aa18.41■□□□□ 0.54
LSM4-202ENST00000593564 TRIM64CA6NLI5 447 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 SOCS1O15524 211 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 HSPA12AO43301 675 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 CA2P00918 260 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 TFAP2AP05549 437 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 UCHL1P09936 223 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 TPPP2P59282 170 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 FAM89BQ8N5H3 189 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 MS4A10Q96PG2 267 aa18.4■□□□□ 0.54
LSM4-202ENST00000593564 TSNAXQ99598 290 aaKnown RBP18.4■□□□□ 0.54
LSM4-202ENST00000593564 HDHD3Q9BSH5 251 aaPredicted RBP18.4■□□□□ 0.54
LSM4-202ENST00000593564 URM1Q9BTM9 101 aaKnown RBP18.4■□□□□ 0.54
LSM4-202ENST00000593564 LSM2Q9Y333 95 aaKnown RBP18.4■□□□□ 0.54
LSM4-202ENST00000593564 PROP1O75360 226 aa18.39■□□□□ 0.53
LSM4-202ENST00000593564 CPEP16870 476 aa18.39■□□□□ 0.53
LSM4-202ENST00000593564 SPHARQ15513 63 aa18.39■□□□□ 0.53
LSM4-202ENST00000593564 OGFRL1Q5TC84 451 aaPredicted RBP18.39■□□□□ 0.53
LSM4-202ENST00000593564 DRAXINQ8NBI3 349 aaPredicted RBP18.39■□□□□ 0.53
LSM4-202ENST00000593564 ZMAT4Q9H898 229 aa18.39■□□□□ 0.53
LSM4-202ENST00000593564 HSF4Q9ULV5 492 aa18.39■□□□□ 0.53
LSM4-202ENST00000593564 FOXI3A8MTJ6 420 aaPredicted RBP18.38■□□□□ 0.53
LSM4-202ENST00000593564 IGKV1-16P04430 117 aa18.38■□□□□ 0.53
LSM4-202ENST00000593564 Q9N2K0 584 aa18.38■□□□□ 0.53
LSM4-202ENST00000593564 C12orf4Q9NQ89 552 aa18.38■□□□□ 0.53
LSM4-202ENST00000593564 TENM2Q9NT68 2774 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 TRGV3P03979 118 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 SCTP09683 121 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 SNRPBP14678 240 aaKnown RBP18.37■□□□□ 0.53
LSM4-202ENST00000593564 PDPNQ86YL7 162 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 ZNF383Q8NA42 475 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 ELOVL1Q9BW60 279 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 ZNF221Q9UK13 617 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 STUB1Q9UNE7 303 aa18.37■□□□□ 0.53
LSM4-202ENST00000593564 SLC17A2O00624 439 aa18.36■□□□□ 0.53
LSM4-202ENST00000593564 CASQ2O14958 399 aaPredicted RBP18.36■□□□□ 0.53
LSM4-202ENST00000593564 ARSBP15848 533 aa18.36■□□□□ 0.53
LSM4-202ENST00000593564 RPS16P62249 146 aaKnown RBP18.36■□□□□ 0.53
LSM4-202ENST00000593564 P2RY14Q15391 338 aa18.36■□□□□ 0.53
LSM4-202ENST00000593564 SRSF7Q16629 238 aaKnown RBP eCLIP18.36■□□□□ 0.53
LSM4-202ENST00000593564 GFI1Q99684 422 aa18.36■□□□□ 0.53
LSM4-202ENST00000593564 PTGES3LE9PB15 166 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 H3BUA1 57 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 APOA2P02652 100 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 LYL1P12980 280 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 TMEM50BP56557 158 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 LINC00205P59089 165 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 FXYD3Q14802 87 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 MED22Q15528 200 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 POC5Q8NA72 575 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 GRPEL2Q8TAA5 225 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 UFD1Q92890 307 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 PLGRKTQ9HBL7 147 aa18.35■□□□□ 0.53
LSM4-202ENST00000593564 RANGRFQ9HD47 186 aaPredicted RBP18.35■□□□□ 0.53
LSM4-202ENST00000593564 IGKV1-6A0A0C4DH72 117 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 SLC25A17O43808 307 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 IGLV1-51P01701 117 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 ZP3P21754 424 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 LIPKQ5VXJ0 399 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 HAPLN4Q86UW8 402 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 Q8N1Y9 231 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.34■□□□□ 0.53
LSM4-202ENST00000593564 TMEM203Q969S6 136 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 ARHGAP5-AS1Q96IT6 56 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 CITED4Q96RK1 184 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms