RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 HSD17B10Q99714 261 aaKnown RBP16.38■□□□□ 0.21
CLIP3-206ENST00000593074 KCNJ16Q9NPI9 418 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 PSG11Q9UQ72 335 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 ZGRF1Q86YA3 2104 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 MEX3AA1L020 520 aaKnown RBP16.38■□□□□ 0.21
CLIP3-206ENST00000593074 C17orf98A8MV24 154 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 ST8SIA5O15466 376 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 S1PR2O95136 353 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 CLDN1O95832 211 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 F12P00748 615 aaPredicted RBP16.38■□□□□ 0.21
CLIP3-206ENST00000593074 IGHV1-46P01743 117 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 GUK1Q16774 197 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 SSX8Q7RTT4 187 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 ZNRF1Q8ND25 227 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 NCOR1P1Q9H4R4 102 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 GCM1Q9NP62 436 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 HSPB7Q9UBY9 170 aa16.38■□□□□ 0.21
CLIP3-206ENST00000593074 DEFB108AA8MXU0 73 aa16.37■□□□□ 0.21
CLIP3-206ENST00000593074 G6PCP35575 357 aa16.37■□□□□ 0.21
CLIP3-206ENST00000593074 TNFAIP6P98066 277 aaPredicted RBP16.37■□□□□ 0.21
CLIP3-206ENST00000593074 RUNX1Q01196 453 aa16.37■□□□□ 0.21
CLIP3-206ENST00000593074 TNFRSF9Q07011 255 aa16.37■□□□□ 0.21
CLIP3-206ENST00000593074 ZNF816Q0VGE8 651 aaPredicted RBP16.37■□□□□ 0.21
CLIP3-206ENST00000593074 Q3ZCU0 254 aa16.37■□□□□ 0.21
CLIP3-206ENST00000593074 PTPRQQ9UMZ3 2332 aa16.37■□□□□ 0.21
CLIP3-206ENST00000593074 PIEZO2Q9H5I5 2752 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 F2RL2O00254 374 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 CLDN14O95500 239 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 KRASP01116 189 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 ATF4P18848 351 aaPredicted RBP16.36■□□□□ 0.21
CLIP3-206ENST00000593074 NPBWR1P48145 328 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 UBE2KP61086 200 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 PEA15Q15121 130 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 C14orf79Q96F83 325 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 VKORC1Q9BQB6 163 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 RNF7Q9UBF6 113 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 LAMP3Q9UQV4 416 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 A0A1B0GW64 132 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 DPRXA6NFQ7 191 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 LINC00473A8K010 186 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 MORN2Q502X0 79 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 HAPLN4Q86UW8 402 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 ZNF561Q8N587 486 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 Q8TCH9 128 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 HIPK2Q9H2X6 1198 aa16.36■□□□□ 0.21
CLIP3-206ENST00000593074 CACNA1DQ01668 2161 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 MED19A0JLT2 244 aaPredicted RBP16.35■□□□□ 0.21
CLIP3-206ENST00000593074 YPEL1O60688 119 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 IFNA5P01569 189 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 THBDP07204 575 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 LOXL3P58215 753 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 DHRS7BQ6IAN0 325 aaPredicted RBP16.35■□□□□ 0.21
CLIP3-206ENST00000593074 SDSLQ96GA7 329 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 YPEL2Q96QA6 119 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 ABHD14AQ9BUJ0 271 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 OR6C3Q9NZP0 311 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 GNG12Q9UBI6 72 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 KPTNQ9Y664 436 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 USF3Q68DE3 2245 aa16.35■□□□□ 0.21
CLIP3-206ENST00000593074 LRRC30A6NM36 301 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 METTL15P1P0C7V9 234 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 TNFSF4P23510 183 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 HBG1P69891 147 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 HBG2P69892 147 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 ARL16Q0P5N6 197 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 FAM201AQ5SY85 155 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 STUMQ69YW2 141 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 ZNF525Q8N782 197 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 CLRN3Q8NCR9 226 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 PBDC1Q9BVG4 233 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 RBKSQ9H477 322 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 TRGV8A0A0C4DH27 118 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 RAB29O14966 203 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 CGB3P0DN86 165 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 CGB7P0DN87 165 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 PPT1P50897 306 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 LTC4SQ16873 150 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 SP5Q6BEB4 398 aaPredicted RBP16.34■□□□□ 0.21
CLIP3-206ENST00000593074 DPPA3Q6W0C5 159 aa16.34■□□□□ 0.21
CLIP3-206ENST00000593074 EIF5A2Q9GZV4 153 aaKnown RBP16.34■□□□□ 0.21
CLIP3-206ENST00000593074 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.34■□□□□ 0.21
CLIP3-206ENST00000593074 BTBD17A6NE02 478 aa16.33■□□□□ 0.21
CLIP3-206ENST00000593074 GPR12P47775 334 aa16.33■□□□□ 0.21
CLIP3-206ENST00000593074 EDDM3BP56851 147 aa16.33■□□□□ 0.21
CLIP3-206ENST00000593074 SPSB3Q6PJ21 355 aa16.33■□□□□ 0.21
CLIP3-206ENST00000593074 CD300LFQ8TDQ1 290 aa16.33■□□□□ 0.21
CLIP3-206ENST00000593074 CALYQ9NYX4 217 aa16.33■□□□□ 0.21
CLIP3-206ENST00000593074 PPIHO43447 177 aaKnown RBP16.33■□□□□ 0.2
CLIP3-206ENST00000593074 PROP1O75360 226 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 SELLP14151 372 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 DUTP33316 252 aaKnown RBP16.33■□□□□ 0.2
CLIP3-206ENST00000593074 CASP6P55212 293 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 BSPH1Q075Z2 132 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 AKR1C8PQ5T2L2 129 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 TMEM88Q6PEY1 159 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 TMEM14EPQ6UXP3 125 aa16.33■□□□□ 0.2
CLIP3-206ENST00000593074 PARD6GQ9BYG4 376 aaPredicted RBP16.33■□□□□ 0.2
CLIP3-206ENST00000593074 PLCE1Q9P212 2302 aa16.32■□□□□ 0.2
CLIP3-206ENST00000593074 OR8U8P0C7N1 319 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms