RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 TMEM30BQ3MIR4 351 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 OR2B11Q5JQS5 317 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 C12orf54Q6X4T0 127 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 ZNF818PQ6ZRF7 136 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 BEND2Q8NDZ0 799 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 ST6GALNAC6Q969X2 333 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 MOB3AQ96BX8 217 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 CCDC32Q9BV29 185 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 TOLLIPQ9H0E2 274 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 SDHAF2Q9NX18 166 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 RABL2AQ9UBK7 228 aaPredicted RBP7.77□□□□□ -1.17
DDX39A-220ENST00000593008 RABL2BQ9UNT1 228 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 OR2W1Q9Y3N9 320 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 LINC00473A8K010 186 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 M0R1X1 148 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 HAX1O00165 279 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 HTR1DP28221 377 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 GPR12P47775 334 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 INPP1P49441 399 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 ARHGDIBP52566 201 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 LGALS4P56470 323 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 HERV-K104P61576 105 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 TSPAN5P62079 268 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 RPL30P62888 115 aaKnown RBP7.76□□□□□ -1.17
DDX39A-220ENST00000593008 SSBP1Q04837 148 aaKnown RBP7.76□□□□□ -1.17
DDX39A-220ENST00000593008 PHLDA2Q53GA4 152 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 ACTBL2Q562R1 376 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 IDO2Q6ZQW0 420 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 ZNF833PQ6ZTB9 187 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 LINC00311Q8N616 119 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 DRAM1Q8N682 238 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 MARCH1Q8TCQ1 289 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 SLC5A7Q9GZV3 580 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 TAS2R8Q9NYW2 309 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 PRR13Q9NZ81 148 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 FLVCR2Q9UPI3 526 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 VSIG4Q9Y279 399 aa7.76□□□□□ -1.17
DDX39A-220ENST00000593008 TMEM89A2RUT3 159 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 TIMM23O14925 209 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 LYRM1O43325 122 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 RGS11O94810 467 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 DIRAS3O95661 229 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 IGHV4-59P01825 116 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 IFNA6P05013 189 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
DDX39A-220ENST00000593008 CTXN2P0C2S0 81 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 CT45A6P0DMU7 189 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 CT45A5P0DMU8 189 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 CT45A7P0DMV0 189 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 TBPP20226 339 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 GNRHRP30968 328 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 LUMP51884 338 aaPredicted RBP7.75□□□□□ -1.17
DDX39A-220ENST00000593008 PRRX1P54821 245 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 EIF4EBP1Q13541 118 aaPredicted RBP7.75□□□□□ -1.17
DDX39A-220ENST00000593008 MEF2DQ14814 521 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 DHRS11Q6UWP2 260 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 Q6YL49 198 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 C8orf31Q8N9H6 132 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 ZNF383Q8NA42 475 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 ADAD2Q8NCV1 583 aaKnown RBP7.75□□□□□ -1.17
DDX39A-220ENST00000593008 OR6F1Q8NGZ6 308 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 GIMAP1Q8WWP7 306 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 RTN4IP1Q8WWV3 396 aaPredicted RBP7.75□□□□□ -1.17
DDX39A-220ENST00000593008 CFHR4Q92496 578 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 TMEM230Q96A57 120 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 RITA1Q96K30 269 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 GHITMQ9H3K2 345 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 DPM3Q9P2X0 92 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 ZNF107Q9UII5 783 aaPredicted RBP7.75□□□□□ -1.17
DDX39A-220ENST00000593008 FAM96BQ9Y3D0 163 aa7.75□□□□□ -1.17
DDX39A-220ENST00000593008 RBM7Q9Y580 266 aaKnown RBP7.75□□□□□ -1.17
DDX39A-220ENST00000593008 IGHV1-3A0A0C4DH29 117 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 SH2D7A6NKC9 451 aaPredicted RBP7.74□□□□□ -1.17
DDX39A-220ENST00000593008 LEUTXA8MZ59 168 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 DISC1C4P0D8 188 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 CLDN34H7C241 214 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 RLN1P04808 185 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 PGAM2P15259 253 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 ZNF137PP52743 207 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 BRWD1-AS2P59051 145 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 ASAH1Q13510 395 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 LY6EQ16553 131 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 MIDNQ504T8 468 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 AWAT1Q58HT5 328 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 LY6G6FQ5SQ64 297 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 C16orf87Q6PH81 154 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 TMEM219Q86XT9 240 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 TGIF2LXQ8IUE1 241 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 ARRDC1Q8N5I2 433 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 ZNF645Q8N7E2 425 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 C3orf56Q8N813 242 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 PIFOQ8TCI5 191 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 BORCS5Q969J3 196 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 RPEQ96AT9 228 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 NABP2Q9BQ15 211 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 CHIAQ9BZP6 476 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 C5orf66Q9H5L9 145 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 BEX1Q9HBH7 125 aa7.74□□□□□ -1.17
DDX39A-220ENST00000593008 TBL2Q9Y4P3 447 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms