RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 LMO1P25800 156 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 MYCNOSP40205 109 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 OR3A1P47881 315 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 OR3A4PP47883 348 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 NPBWR2P48146 333 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 TAS2R46P59540 309 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 ARFRP1Q13795 201 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 MEF2DQ14814 521 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 SRSF7Q16629 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
BRCA1-226ENST00000591534 HLA-DRB5Q30154 266 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 TCTEX1D4Q5JR98 221 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 KRBOX4Q5JUW0 171 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 TRAT1Q6PIZ9 186 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 MOB1BQ7L9L4 216 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 FOXRED2Q8IWF2 684 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 TOMM5Q8N4H5 51 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 LINC00482Q8N8I6 264 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 OR5AN1Q8NGI8 311 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 OR9G1Q8NH87 305 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 TOMM40LQ969M1 308 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 SCGB3A2Q96PL1 93 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 SOSTQ9BQB4 213 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 THAP7Q9BT49 309 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-226ENST00000591534 GON7Q9BXV9 100 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 SELENOIQ9C0D9 397 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 SRRQ9GZT4 340 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 IFT46Q9NQC8 304 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 ST3GAL6Q9Y274 331 aa7.49□□□□□ -1.21
BRCA1-226ENST00000591534 TRAV18A0A075B6X5 111 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 A0A087X0M5 115 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 IGKV1-12A0A0C4DH73 117 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 A0A1B0GX30 115 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 WI2-2373I1.2A0A1W2PRP0 233 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 SMIM30A4D0T7 59 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 DEGS1O15121 323 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 FGF16O43320 207 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 PDCD6O75340 191 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 MMP23AO75900 390 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 DIRAS3O95661 229 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 IGKV1D-12P01611 117 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 HLA-DQB1P01920 261 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 EIF4EP06730 217 aaKnown RBP7.48□□□□□ -1.21
BRCA1-226ENST00000591534 CD3GP09693 182 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 CTXN2P0C2S0 81 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 HIST1H1DP16402 221 aaKnown RBP7.48□□□□□ -1.21
BRCA1-226ENST00000591534 DTYMKP23919 212 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 NFYBP25208 207 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 BLVRBP30043 206 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-226ENST00000591534 HOXD3P31249 432 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-226ENST00000591534 RAB7AP51149 207 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 SNU13P55769 128 aaKnown RBP7.48□□□□□ -1.21
BRCA1-226ENST00000591534 CLDN12P56749 244 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 RBM11P57052 281 aaKnown RBP7.48□□□□□ -1.21
BRCA1-226ENST00000591534 TAS2R19P59542 299 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 TAS2R20P59543 309 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 RPL23AP62750 156 aaKnown RBP7.48□□□□□ -1.21
BRCA1-226ENST00000591534 QRFPP83859 136 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 DGCR2P98153 550 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 AESQ08117 197 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 MADCAM1Q13477 382 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 HES1Q14469 280 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 KIR2DS1Q14954 304 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 ZNF554Q86TJ5 538 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 GFI1Q99684 422 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 MIXL1Q9H2W2 232 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 SLC23A1Q9UHI7 598 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 SCP2D1Q9UJQ7 156 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 V9GYH0 126 aa7.48□□□□□ -1.21
BRCA1-226ENST00000591534 KBTBD11-OT1A0A1B0GTJ5 212 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 OR7C1O76099 320 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-226ENST00000591534 IFNA6P05013 189 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 TMEM11P17152 192 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 GLIPR1P48060 266 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 THBS3P49746 956 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 VEGFCP49767 419 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 ASAH1Q13510 395 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 TRIM16LQ309B1 348 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 TMEM30BQ3MIR4 351 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 ZNF57Q68EA5 555 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-226ENST00000591534 C11orf87Q6NUJ2 197 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 OR8H3Q8N146 312 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 OR5D18Q8NGL1 313 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 OR5H6Q8NGV6 325 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 ORAI1Q96D31 301 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 SLC25A38Q96DW6 304 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 LPAR5Q9H1C0 372 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 NCOR1P1Q9H4R4 102 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 AUNIPQ9H7T9 357 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 ZNF286AQ9HBT8 521 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 C12orf4Q9NQ89 552 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 MTFP1Q9UDX5 166 aa7.47□□□□□ -1.21
BRCA1-226ENST00000591534 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.21
BRCA1-226ENST00000591534 FAM172BPA6NC97 362 aa7.46□□□□□ -1.22
BRCA1-226ENST00000591534 FAM90A9PA6NNJ1 464 aa7.46□□□□□ -1.22
BRCA1-226ENST00000591534 DISC1C4P0D8 188 aa7.46□□□□□ -1.22
BRCA1-226ENST00000591534 LY6LH3BQJ8 138 aa7.46□□□□□ -1.22
BRCA1-226ENST00000591534 RAB27BO00194 218 aa7.46□□□□□ -1.22
BRCA1-226ENST00000591534 AMY1AP04745 511 aa7.46□□□□□ -1.22
BRCA1-226ENST00000591534 IL7P13232 177 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms