RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 MS4A10Q96PG2 267 aa12.13□□□□□ -0.47
CIRBP-230ENST00000591055 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
CIRBP-230ENST00000591055 TMED9Q9BVK6 235 aa12.13□□□□□ -0.47
CIRBP-230ENST00000591055 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
CIRBP-230ENST00000591055 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
CIRBP-230ENST00000591055 LYSTQ99698 3801 aa12.13□□□□□ -0.47
CIRBP-230ENST00000591055 SACSQ9NZJ4 4579 aa12.13□□□□□ -0.47
CIRBP-230ENST00000591055 TMEM14DPA8MWL7 114 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 ARPC1BO15143 372 aaKnown RBP12.12□□□□□ -0.47
CIRBP-230ENST00000591055 HSPA12AO43301 675 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 CEACAM6P40199 344 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 PSG5Q15238 335 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 SRSF7Q16629 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
CIRBP-230ENST00000591055 ZNF562Q6V9R5 426 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 LFNGQ8NES3 379 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 EDARADDQ8WWZ3 215 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 RHOVQ96L33 236 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 ELOVL1Q9BW60 279 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 C11orf54Q9H0W9 315 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-230ENST00000591055 SLA2Q9H6Q3 261 aa12.12□□□□□ -0.47
CIRBP-230ENST00000591055 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 TRBV6-6A0A0A6YYG2 114 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 SLC22A1O15245 554 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 BPNT1O95861 308 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 CA2P00918 260 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 LYL1P12980 280 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 CPEP16870 476 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 SRMP19623 302 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 ZBTB25P24278 435 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 QRFPP83859 136 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 HSD17B12Q53GQ0 312 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 CEACAM19Q7Z692 300 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 FBLIM1Q8WUP2 373 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 TSNAXQ99598 290 aaKnown RBP12.11□□□□□ -0.47
CIRBP-230ENST00000591055 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-230ENST00000591055 MND1Q9BWT6 205 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 PALMDQ9NP74 551 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 FKBP14Q9NWM8 211 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 AK3Q9UIJ7 227 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 MGAT4AQ9UM21 535 aa12.11□□□□□ -0.47
CIRBP-230ENST00000591055 SOCS1O15524 211 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 SPDEFO95238 335 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 TRGV3P03979 118 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 TFAP2AP05549 437 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 RPS16P62249 146 aaKnown RBP12.1□□□□□ -0.47
CIRBP-230ENST00000591055 DRAXINQ8NBI3 349 aaPredicted RBP12.1□□□□□ -0.47
CIRBP-230ENST00000591055 OR6M1Q8NGM8 313 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 URM1Q9BTM9 101 aaKnown RBP12.1□□□□□ -0.47
CIRBP-230ENST00000591055 LPAR5Q9H1C0 372 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 ZNF221Q9UK13 617 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
CIRBP-230ENST00000591055 CSMD3Q7Z407 3707 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 IGKV1-16P04430 117 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 CDK1P06493 297 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 CD37P11049 281 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 SNRPBP14678 240 aaKnown RBP12.09□□□□□ -0.47
CIRBP-230ENST00000591055 FXYD3Q14802 87 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 RCN1Q15293 331 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 P2RY14Q15391 338 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 RNLSQ5VYX0 342 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 HAPLN4Q86UW8 402 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 ANKRD13BQ86YJ7 626 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 PTX4Q96A99 478 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 ZNF355PQ9NSJ1 428 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 TNCP24821 2201 aa12.09□□□□□ -0.47
CIRBP-230ENST00000591055 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 LDLRAD4O15165 306 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 SLC25A17O43808 307 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 PROP1O75360 226 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 APOA2P02652 100 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 SCTP09683 121 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 UCHL1P09936 223 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 ARSBP15848 533 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 SPHARQ15513 63 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 FAM89BQ8N5H3 189 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 POC5Q8NA72 575 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 CITED4Q96RK1 184 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 PLGRKTQ9HBL7 147 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 RANGRFQ9HD47 186 aaPredicted RBP12.08□□□□□ -0.48
CIRBP-230ENST00000591055 Q9N2K0 584 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 C12orf4Q9NQ89 552 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 STARD9Q9P2P6 4700 aa12.08□□□□□ -0.48
CIRBP-230ENST00000591055 PTGES3LE9PB15 166 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 H3BUA1 57 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 CNIH1O95406 144 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 IGLV1-51P01701 117 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 IGHV4-30-4P0DP06 118 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 ZP3P21754 424 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 LINC00205P59089 165 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 MED22Q15528 200 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 SGPP2Q8IWX5 399 aa12.07□□□□□ -0.48
CIRBP-230ENST00000591055 Q8N1Y9 231 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms