RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ARPC1AQ92747 370 aa16.79■□□□□ 0.28
DDX39A-215ENST00000590696 MS4A10Q96PG2 267 aa16.79■□□□□ 0.28
DDX39A-215ENST00000590696 RNF5Q99942 180 aa16.79■□□□□ 0.28
DDX39A-215ENST00000590696 C11orf54Q9H0W9 315 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-215ENST00000590696 LPAR5Q9H1C0 372 aa16.79■□□□□ 0.28
DDX39A-215ENST00000590696 METTL1Q9UBP6 276 aaKnown RBP16.79■□□□□ 0.28
DDX39A-215ENST00000590696 AK3Q9UIJ7 227 aa16.79■□□□□ 0.28
DDX39A-215ENST00000590696 SORL1Q92673 2214 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 PTGES3LE9PB15 166 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 HSPA12AO43301 675 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 UCHL1P09936 223 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 SNRPBP14678 240 aaKnown RBP16.78■□□□□ 0.28
DDX39A-215ENST00000590696 GP9P14770 177 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 ZBTB25P24278 435 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 HLA-DRB3P79483 266 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 PSG5Q15238 335 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 SPHARQ15513 63 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 AKIRIN2Q53H80 203 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 ACTBL2Q562R1 376 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 DRAXINQ8NBI3 349 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-215ENST00000590696 OR6M1Q8NGM8 313 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 OR6Q1Q8NGQ2 317 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 EDARADDQ8WWZ3 215 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 RCHY1Q96PM5 261 aa16.78■□□□□ 0.28
DDX39A-215ENST00000590696 URM1Q9BTM9 101 aaKnown RBP16.78■□□□□ 0.28
DDX39A-215ENST00000590696 LSM2Q9Y333 95 aaKnown RBP16.78■□□□□ 0.28
DDX39A-215ENST00000590696 PROP1O75360 226 aa16.77■□□□□ 0.28
DDX39A-215ENST00000590696 HSPB1P04792 205 aaKnown RBP16.77■□□□□ 0.28
DDX39A-215ENST00000590696 MED22Q15528 200 aa16.77■□□□□ 0.28
DDX39A-215ENST00000590696 ZNF562Q6V9R5 426 aa16.77■□□□□ 0.28
DDX39A-215ENST00000590696 LFNGQ8NES3 379 aa16.77■□□□□ 0.28
DDX39A-215ENST00000590696 CASQ2O14958 399 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-215ENST00000590696 CA2P00918 260 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 SCTP09683 121 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 OR8U9P0C7N5 309 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 FRMD6-AS1P0C7T7 363 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 CPEP16870 476 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 CD40LGP29965 261 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 TPPP2P59282 170 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 PITPNAQ00169 270 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 P2RY14Q15391 338 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 FAM89BQ8N5H3 189 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 MUC7Q8TAX7 377 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 FLYWCH2Q96CP2 140 aaKnown RBP16.76■□□□□ 0.27
DDX39A-215ENST00000590696 RHOVQ96L33 236 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 MGAT4AQ9UM21 535 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 STAB2Q8WWQ8 2551 aa16.76■□□□□ 0.27
DDX39A-215ENST00000590696 TRIM64CA6NLI5 447 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 ARSBP15848 533 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 TMEM50BP56557 158 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 LINC00205P59089 165 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 RPS16P62249 146 aaKnown RBP16.75■□□□□ 0.27
DDX39A-215ENST00000590696 LIPKQ5VXJ0 399 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 TMEM203Q969S6 136 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 PTX4Q96A99 478 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 OR4C12Q96R67 309 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 TSNAXQ99598 290 aaKnown RBP16.75■□□□□ 0.27
DDX39A-215ENST00000590696 GFI1Q99684 422 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 SLA2Q9H6Q3 261 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 PLGRKTQ9HBL7 147 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 Q9N2K0 584 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 HSF4Q9ULV5 492 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 DNAH7Q8WXX0 4024 aa16.75■□□□□ 0.27
DDX39A-215ENST00000590696 FOXI3A8MTJ6 420 aaPredicted RBP16.74■□□□□ 0.27
DDX39A-215ENST00000590696 IGKV1-16P04430 117 aa16.74■□□□□ 0.27
DDX39A-215ENST00000590696 TFAP2AP05549 437 aa16.74■□□□□ 0.27
DDX39A-215ENST00000590696 ZNF383Q8NA42 475 aa16.74■□□□□ 0.27
DDX39A-215ENST00000590696 ZNF221Q9UK13 617 aa16.74■□□□□ 0.27
DDX39A-215ENST00000590696 AK6Q9Y3D8 172 aaKnown RBP16.74■□□□□ 0.27
DDX39A-215ENST00000590696 SLC17A2O00624 439 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 SPDEFO95238 335 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 TRGV3P03979 118 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 VEGFCP49767 419 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 SRSF7Q16629 238 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDX39A-215ENST00000590696 CASC10Q5T4H9 136 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 UFD1Q92890 307 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 ARHGAP5-AS1Q96IT6 56 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 PECRQ9BY49 303 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 C12orf4Q9NQ89 552 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 SCN3BQ9NY72 215 aa16.73■□□□□ 0.27
DDX39A-215ENST00000590696 IGKV1-6A0A0C4DH72 117 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 ARPC1BO15143 372 aaKnown RBP16.72■□□□□ 0.27
DDX39A-215ENST00000590696 IRF3Q14653 427 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 FXYD3Q14802 87 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 TMEM91Q6ZNR0 172 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 HAPLN4Q86UW8 402 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 PDPNQ86YL7 162 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 GRPEL2Q8TAA5 225 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 CMSS1Q9BQ75 279 aaKnown RBP16.72■□□□□ 0.27
DDX39A-215ENST00000590696 ELOVL1Q9BW60 279 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 VCXQ9H320 206 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 ZMAT4Q9H898 229 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 ZNF355PQ9NSJ1 428 aa16.72■□□□□ 0.27
DDX39A-215ENST00000590696 SLC25A17O43808 307 aa16.71■□□□□ 0.27
DDX39A-215ENST00000590696 APOA2P02652 100 aa16.71■□□□□ 0.27
DDX39A-215ENST00000590696 RAB11BQ15907 218 aa16.71■□□□□ 0.27
DDX39A-215ENST00000590696 RDH8Q9NYR8 311 aa16.71■□□□□ 0.27
DDX39A-215ENST00000590696 TRDCB7Z8K6 153 aa16.7■□□□□ 0.26
DDX39A-215ENST00000590696 M0R1X1 148 aa16.7■□□□□ 0.26
DDX39A-215ENST00000590696 HSMCR30P0CW71 290 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms