RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ZNF703Q9H7S9 590 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 FOXD3Q9UJU5 478 aaPredicted RBP14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 ZNF835Q9Y2P0 537 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 HEATR5AQ86XA9 2040 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 COL4A3Q01955 1670 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 SNRNP200O75643 2136 aaKnown RBP14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 S1PR2O95136 353 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 TRGC1P0CF51 173 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 OR8G5Q8NG78 346 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 WIPI2Q9Y4P8 454 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 FAM157CP0CG43 387 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 DMRTA2Q96SC8 542 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 FAM90A26D6RGX4 464 aa14.6□□□□□ -0.07
SMARCA4-215ENST00000590574 PROB1E7EW31 1015 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 CHEK1O14757 476 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 HPRT1P00492 218 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 CRISP2P16562 243 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 ADCYAP1P18509 176 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 RANP62826 216 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 FKBP11Q9NYL4 201 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 K7EQM0 130 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 NDUFB4O95168 129 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 RPL29P47914 159 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 ABLIM2Q6H8Q1 611 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 NDUFB3O43676 98 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 LILRB1Q8NHL6 650 aaPredicted RBP14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 ADTRPQ96IZ2 230 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 HES4Q9HCC6 221 aa14.59□□□□□ -0.07
SMARCA4-215ENST00000590574 TRAV38-1A0A0B4J264 116 aa14.58□□□□□ -0.07
SMARCA4-215ENST00000590574 FAM214BQ7L5A3 538 aa14.58□□□□□ -0.07
SMARCA4-215ENST00000590574 RCC1LQ96I51 464 aaKnown RBP14.58□□□□□ -0.07
SMARCA4-215ENST00000590574 WDR61Q9GZS3 305 aaKnown RBP14.58□□□□□ -0.07
SMARCA4-215ENST00000590574 FOXJ2Q9P0K8 574 aa14.58□□□□□ -0.07
SMARCA4-215ENST00000590574 FANCMQ8IYD8 2048 aa14.58□□□□□ -0.07
SMARCA4-215ENST00000590574 ASXL3Q9C0F0 2248 aa14.58□□□□□ -0.07
SMARCA4-215ENST00000590574 TCL1AP56279 114 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 CD81P60033 236 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 LRRC10Q5BKY1 277 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 OR1L6Q8NGR2 347 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 CLDND2Q8NHS1 167 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 RAB24Q969Q5 203 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 MED12Q93074 2177 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 hADV38S2A0JD32 116 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 ZNF716A6NP11 495 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 NPY1RP25929 384 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 TEPPQ6URK8 271 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 TMEM167BQ9NRX6 74 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 TECRQ9NZ01 308 aaKnown RBP14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 OR4D5Q8NGN0 318 aa14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 PSMG3Q9BT73 122 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-215ENST00000590574 VMA21Q3ZAQ7 101 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 RHOVQ96L33 236 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 TUBA4BQ9H853 241 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 ZNF581Q9P0T4 197 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 PXMP4Q9Y6I8 212 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 ZNF891A8MT65 544 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 E9PLN8 166 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 CSRP2Q16527 193 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 SGMS2Q8NHU3 365 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 KLF14Q8TD94 323 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 CHRDL1Q9BU40 450 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 GSN-AS1Q9NRJ2 163 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 COLCA2A8K830 154 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 RAB29O14966 203 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 CLDN14O95500 239 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 CCL20P78556 96 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 MISP3Q96FF7 219 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 GAL3ST2Q9H3Q3 398 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 TMPRSS2O15393 492 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 SRP14P37108 136 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 NRN1LQ496H8 165 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 K7ESF4 209 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 HSBP1O75506 76 aa14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 KLF7O75840 302 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-215ENST00000590574 SDK2Q58EX2 2172 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 LRRC3CA6NJW4 275 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 GATCO43716 136 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 UBE2L3P68036 154 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 HIST3H3Q16695 136 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 TMEM183BQ1AE95 376 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 ATP1A1-AS1Q5TC04 95 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 SLC24A4Q8NFF2 622 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 OR1P1Q8NH06 330 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 DEPPQ9NTK1 212 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 TICRRQ7Z2Z1 1910 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 K7N7A8 449 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 LRTM2Q8N967 370 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 CCL17Q92583 94 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 WBP1Q96G27 269 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 IL17BQ9UHF5 180 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 Q8WTZ3 238 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 BLNKQ8WV28 456 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 PARLQ9H300 379 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 MARCH11A6NNE9 402 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 ARL3P36405 182 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 RNF7Q9UBF6 113 aa14.56□□□□□ -0.08
SMARCA4-215ENST00000590574 CRYABP02511 175 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-215ENST00000590574 ICAM4Q14773 271 aa14.55□□□□□ -0.08
SMARCA4-215ENST00000590574 LRRC75BQ2VPJ9 315 aa14.55□□□□□ -0.08
SMARCA4-215ENST00000590574 RNF166Q96A37 237 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms