RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ASAH1Q13510 395 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 MSMO1Q15800 293 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 SLC38A6Q8IZM9 456 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 DRAM1Q8N682 238 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 OR13C8Q8NGS7 320 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
ATG4D-211ENST00000589753 C5orf30Q96GV9 206 aa12.27□□□□□ -0.45
ATG4D-211ENST00000589753 M0R1X1 148 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 PROP1O75360 226 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 PAX6P26367 422 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 GNRHRP30968 328 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 BTCP35070 178 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 ARHGDIBP52566 201 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 DEFA1P59665 94 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 DEFA3P59666 94 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 BAMBIQ13145 260 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 SURF2Q15527 256 aaPredicted RBP12.26□□□□□ -0.45
ATG4D-211ENST00000589753 DEFB112Q30KQ8 113 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 PLA1AQ53H76 456 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 MZT2BQ6NZ67 158 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 ZNF818PQ6ZRF7 136 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 OR8H3Q8N146 312 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 MARCH1Q8TCQ1 289 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 MRGPRFQ96AM1 343 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 AKR1E2Q96JD6 320 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 RSRP1Q9BUV0 290 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 MEGF9Q9H1U4 602 aa12.26□□□□□ -0.45
ATG4D-211ENST00000589753 IGHV1-3A0A0C4DH29 117 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 MDFIC2A0A1B0GVS7 189 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 A0A1W2PPI3 338 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 GPR31O00270 319 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 CRLF1O75462 422 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 CCR6P51684 374 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 CMTM1Q8IZ96 169 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 BVESQ8NE79 360 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 ZFAND1Q8TCF1 268 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 SCGB3A2Q96PL1 93 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 MRPL20Q9BYC9 149 aaKnown RBP12.25□□□□□ -0.45
ATG4D-211ENST00000589753 PALMDQ9NP74 551 aa12.25□□□□□ -0.45
ATG4D-211ENST00000589753 TIMM23O14925 209 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 TNFSF12O43508 249 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 CT45A6P0DMU7 189 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 CT45A5P0DMU8 189 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 CT45A7P0DMV0 189 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 DCTN2Q13561 401 aaKnown RBP12.24□□□□□ -0.45
ATG4D-211ENST00000589753 RBMS2Q15434 407 aaKnown RBP12.24□□□□□ -0.45
ATG4D-211ENST00000589753 ABCA11PQ4W5N1 156 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 MOB3BQ86TA1 216 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 DRAXINQ8NBI3 349 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-211ENST00000589753 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 ZNF486Q96H40 463 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-211ENST00000589753 ZNF48Q96MX3 618 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-211ENST00000589753 NABP2Q9BQ15 211 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 SLC25A21Q9BQT8 299 aaPredicted RBP12.24□□□□□ -0.45
ATG4D-211ENST00000589753 GPR132Q9UNW8 380 aa12.24□□□□□ -0.45
ATG4D-211ENST00000589753 C14orf166Q9Y224 244 aaKnown RBP12.24□□□□□ -0.45
ATG4D-211ENST00000589753 F8P00451 2351 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 VGLL3A8MV65 326 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 NDUFB6O95139 128 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 CTSDP07339 412 aaPredicted RBP12.23□□□□□ -0.45
ATG4D-211ENST00000589753 PI3P19957 117 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 S100GP29377 79 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 BRS3P32247 399 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 DUTP33316 252 aaKnown RBP12.23□□□□□ -0.45
ATG4D-211ENST00000589753 THBS3P49746 956 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 EIF4EBP1Q13541 118 aaPredicted RBP12.23□□□□□ -0.45
ATG4D-211ENST00000589753 TUSC1Q2TAM9 212 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 LRRC75BQ2VPJ9 315 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 PHLDA2Q53GA4 152 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 GLDNQ6ZMI3 551 aaPredicted RBP12.23□□□□□ -0.45
ATG4D-211ENST00000589753 ZNF66Q6ZN08 573 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 ZDHHC22Q8N966 263 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 POC5Q8NA72 575 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 ADTRPQ96IZ2 230 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 HSD17B10Q99714 261 aaKnown RBP12.23□□□□□ -0.45
ATG4D-211ENST00000589753 DPAGT1Q9H3H5 408 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 PRDM13Q9H4Q3 707 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 VSIG4Q9Y279 399 aa12.23□□□□□ -0.45
ATG4D-211ENST00000589753 FAM240BA0A1B0GVZ2 78 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 PGLYRP1O75594 196 aaPredicted RBP12.22□□□□□ -0.45
ATG4D-211ENST00000589753 FAM157CP0CG43 387 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 SLC6A1P30531 599 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 DYNLT3P51808 116 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 LINC00205P59089 165 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 HABP2Q14520 560 aaPredicted RBP12.22□□□□□ -0.45
ATG4D-211ENST00000589753 AANATQ16613 207 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 RBMS3Q6XE24 437 aaKnown RBP12.22□□□□□ -0.45
ATG4D-211ENST00000589753 Q6YL49 198 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 KCTD9Q7L273 389 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 SIGLECL1Q8N7X8 197 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 CFHR4Q92496 578 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 GPHA2Q96T91 129 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 SSX3Q99909 188 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
ATG4D-211ENST00000589753 C5orf66Q9H5L9 145 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms