RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PARP12Q9H0J9 701 aaKnown RBP8.31□□□□□ -1.08
VPS25-202ENST00000589219 MAGT1Q9H0U3 335 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 C19orf12Q9NSK7 152 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 DUSP13Q9UII6 198 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 ADGRG4Q8IZF6 3080 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 TACC2O95359 2948 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 ODAMA1E959 279 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
VPS25-202ENST00000589219 F8W036 122 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 C15orf65H3BRN8 121 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 K7N7A8 449 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 TOR1AO14656 332 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 TXNL1O43396 289 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 SYNGR2O43760 224 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 CHST1O43916 411 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 SCAF4O95104 1147 aaKnown RBP8.3□□□□□ -1.08
VPS25-202ENST00000589219 SNAPINO95295 136 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 TSPAN15O95858 294 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 IGKV1-5P01602 117 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 PRH1P02810 166 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 MUC1P15941 1255 aaPredicted RBP8.3□□□□□ -1.08
VPS25-202ENST00000589219 ZNF16P17020 682 aaPredicted RBP8.3□□□□□ -1.08
VPS25-202ENST00000589219 PTAFRP25105 342 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 CD40P25942 277 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 GLIPR1P48060 266 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 DYNLT3P51808 116 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 DVL1P1P54792 670 aaPredicted RBP8.3□□□□□ -1.08
VPS25-202ENST00000589219 TAGLNQ01995 201 aaKnown RBP8.3□□□□□ -1.08
VPS25-202ENST00000589219 ZNF273Q14593 569 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 CLINT1Q14677 625 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 MIDNQ504T8 468 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 ZNF585BQ52M93 769 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 TMEM108Q6UXF1 575 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 DPPA3Q6W0C5 159 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 MOGAT3Q86VF5 341 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 LRP11Q86VZ4 500 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.3□□□□□ -1.08
VPS25-202ENST00000589219 HSD17B11Q8NBQ5 300 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 OR52L2PQ8NGH6 319 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 OR5C1Q8NGR4 320 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 UBALD1Q8TB05 177 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 Q8TCH9 128 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 FAM222BQ8WU58 562 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 ITLN1Q8WWA0 313 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 C14orf79Q96F83 325 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 DIRC2Q96SL1 478 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 UQCC1Q9NVA1 299 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 OR6C3Q9NZP0 311 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 CACFD1Q9UGQ2 172 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 IL19Q9UHD0 177 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 OTOGQ6ZRI0 2925 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 CSMD1Q96PZ7 3565 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 PDZD2O15018 2839 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 FBN2P35556 2912 aa8.3□□□□□ -1.08
VPS25-202ENST00000589219 IGKV1D-17A0A075B6S4 117 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 A0A0G2JNJ9 132 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 BTBD17A6NE02 478 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 C16orf97H3BN30 126 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 F2RL2O00254 374 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 ITGB1BP1O14713 200 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 LY86O95711 162 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 TMEM50AO95807 157 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 LHBP01229 141 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 IFNA5P01569 189 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 CD5P06127 495 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 P0C879 139 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 ADCYAP1P18509 176 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 GZMHP20718 246 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 BMP5P22003 454 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 ATP6V0CP27449 155 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 SSTR5P35346 364 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 PPP1CCP36873 323 aaKnown RBP8.29□□□□□ -1.08
VPS25-202ENST00000589219 PAX9P55771 341 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 TNFAIP6P98066 277 aaPredicted RBP8.29□□□□□ -1.08
VPS25-202ENST00000589219 ZNF616Q08AN1 781 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 BTN1A1Q13410 526 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 EDDM3AQ14507 147 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 PEA15Q15121 130 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 VHLLQ6RSH7 139 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 CLEC9AQ6UXN8 241 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 TMEM182Q6ZP80 229 aaPredicted RBP8.29□□□□□ -1.08
VPS25-202ENST00000589219 ZNF561Q8N587 486 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 BOLLQ8N9W6 283 aaKnown RBP8.29□□□□□ -1.08
VPS25-202ENST00000589219 CD300LFQ8TDQ1 290 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 TCTEX1D2Q8WW35 142 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 C5orf30Q96GV9 206 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 PBDC1Q9BVG4 233 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 PARD6GQ9BYG4 376 aaPredicted RBP8.29□□□□□ -1.08
VPS25-202ENST00000589219 MRPL37Q9BZE1 423 aaKnown RBP8.29□□□□□ -1.08
VPS25-202ENST00000589219 MS4A7Q9GZW8 240 aaPredicted RBP8.29□□□□□ -1.08
VPS25-202ENST00000589219 SH3BGRL3Q9H299 93 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 JKAMPQ9P055 326 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 RNF7Q9UBF6 113 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 Q9UFV3 132 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 KPTNQ9Y664 436 aa8.29□□□□□ -1.08
VPS25-202ENST00000589219 A0A1B0GW64 132 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 RNASEK-C17orf49H0YIS7 233 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 RAB29O14966 203 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms