RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 LFNGQ8NES3 379 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 OR4K17Q8NGC6 315 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 OR11L1Q8NGX0 322 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 OR2AE1Q8NHA4 323 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 LHFPL5Q8TAF8 219 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 STOML3Q8TAV4 291 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CDS1Q92903 461 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM159Q96B96 161 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TAMM41Q96BW9 452 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 ZMYND19Q96E35 227 aaPredicted RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 ZHX1-C8orf76Q96EF9 292 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 METTL26Q96S19 204 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TCEAL7Q9BRU2 100 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CHAC1Q9BUX1 264 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SFXN3Q9BWM7 321 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SAMD10Q9BYL1 202 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SLC25A39Q9BZJ4 359 aaPredicted RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 NXF2Q9GZY0 626 aaKnown RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 VCXQ9H320 206 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 RAB26Q9ULW5 256 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 MMACHCQ9Y4U1 282 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 ORC6Q9Y5N6 252 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SLC22A7Q9Y694 548 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CSMD1Q96PZ7 3565 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SHROOM3Q8TF72 1996 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 LOXHD1Q8IVV2 1947 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 BSNQ9UPA5 3926 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 ATG2BQ96BY7 2078 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 NBASA2RRP1 2371 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 PLXNB3Q9ULL4 1909 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 IGKV1-27A0A075B6S5 117 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 KIR2DS1A0A191URI9 304 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 A0A1W2PRG6 482 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 NKX2-6A6NCS4 301 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 METTL15A6NJ78 407 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 C9J4A7 227 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 TAAR5O14804 337 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 PSPHP1O15172 72 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 UBDO15205 165 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 MAGEB4O15481 346 aaPredicted RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 FABP7O15540 132 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 RP2O75695 350 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 SULT1C4O75897 302 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 SLC22A5O76082 557 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 CNIH1O95406 144 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 RAB36O95755 333 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 CYB5R3P00387 301 aaPredicted RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 MT-ND4P03905 459 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 TCRBP04435 133 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 CD5P06127 495 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 UGT2B7P16662 529 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 S100GP29377 79 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 COILP38432 576 aaPredicted RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 RPL5P46777 297 aaKnown RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 SRP9P49458 86 aaKnown RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 PSMB2P49721 201 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 LHX2P50458 406 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 IDH3GP51553 393 aaPredicted RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 AKR1D1P51857 326 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 GFERP55789 205 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 TAS2R31P59538 309 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 RAB2AP61019 212 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 RHOAP61586 193 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 NAA20P61599 178 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 CRADDP78560 199 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 LAMTOR4Q0VGL1 99 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 BNIP2Q12982 314 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 PNOCQ13519 176 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 POU6F1Q14863 301 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 CEACAM21Q3KPI0 293 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 C6orf99Q4VX62 202 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 ACSM3Q53FZ2 586 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 FAM78AQ5JUQ0 283 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 TIMM23BQ5SRD1 257 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 OPN5Q6U736 354 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 UGT2A3Q6UWM9 527 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 ZNF429Q86V71 674 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 MDP1Q86V88 176 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 CALHM1Q8IU99 346 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 WDFY1Q8IWB7 410 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 ZCCHC24Q8N2G6 241 aaKnown RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 PXT1Q8NFP0 134 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 OR6N1Q8NGY5 312 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 OR13G1Q8NGZ3 307 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 GRPEL2Q8TAA5 225 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 FAM45AQ8TCE6 357 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 DCAKDQ8WVC6 231 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 RNF138Q8WVD3 245 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 TNFAIP8L1Q8WVP5 186 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 FAM104AQ969W3 186 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 PTH2Q96A98 100 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 PTX4Q96A99 478 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 EXOSC8Q96B26 276 aaKnown RBP2□□□□□ -2.09
VPS4B-203ENST00000588323 TESCQ96BS2 214 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 WDR34Q96EX3 536 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 SMARCD1Q96GM5 515 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 SFRP2Q96HF1 295 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 CAPZA3Q96KX2 299 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 OR2M4Q96R27 311 aa2□□□□□ -2.09
VPS4B-203ENST00000588323 HBEGFQ99075 208 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms