RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PAX9P55771 341 aa12.27□□□□□ -0.45
CCDC43-203ENST00000588210 C1QL4Q86Z23 238 aa12.27□□□□□ -0.45
CCDC43-203ENST00000588210 H1FOOQ8IZA3 346 aaPredicted RBP12.27□□□□□ -0.45
CCDC43-203ENST00000588210 LURAP1Q96LR2 239 aa12.27□□□□□ -0.45
CCDC43-203ENST00000588210 OR2W1Q9Y3N9 320 aa12.27□□□□□ -0.45
CCDC43-203ENST00000588210 MPC1Q9Y5U8 109 aa12.27□□□□□ -0.45
CCDC43-203ENST00000588210 FBN2P35556 2912 aa12.27□□□□□ -0.45
CCDC43-203ENST00000588210 ABCA4P78363 2273 aa12.27□□□□□ -0.45
CCDC43-203ENST00000588210 CENPEQ02224 2701 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 CHST1O43916 411 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 PLAUP00749 431 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 SRP19P09132 144 aaKnown RBP12.26□□□□□ -0.45
CCDC43-203ENST00000588210 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 ADAM5Q6NVV9 412 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 ZNF573Q86YE8 665 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 RBMXL1Q96E39 390 aaKnown RBP12.26□□□□□ -0.45
CCDC43-203ENST00000588210 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
CCDC43-203ENST00000588210 PUS1Q9Y606 427 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCDC43-203ENST00000588210 TRAV24A0A0B4J272 114 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 A0A1B0GU03 582 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 ANKRD30BLA7E2S9 258 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 NPIPB11E5RHQ5 1161 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 DEGS1O15121 323 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 DFFBO76075 338 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 HBE1P02100 147 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 CRYAAP02489 173 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 HSPB1P04792 205 aaKnown RBP12.26□□□□□ -0.45
CCDC43-203ENST00000588210 CECR9P0C854 216 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 IDH3GP51553 393 aaPredicted RBP12.26□□□□□ -0.45
CCDC43-203ENST00000588210 GNG3P63215 75 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 ZNF154Q13106 437 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 AKR1C8PQ5T2L2 129 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 C20orf204Q6ZNR8 217 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 STX12Q86Y82 276 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 PKIBQ9C010 78 aa12.26□□□□□ -0.45
CCDC43-203ENST00000588210 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 TNFSF12O43508 249 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 SCAF4O95104 1147 aaKnown RBP12.25□□□□□ -0.45
CCDC43-203ENST00000588210 OR2C1O95371 312 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 TAS2R30P59541 319 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 RUNX1Q01196 453 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 PLP2Q04941 152 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 FABP9Q0Z7S8 132 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 ICAM4Q14773 271 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 FAM58AQ8N1B3 248 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 TMEM217Q8N7C4 229 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 OR10J5Q8NHC4 309 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 A0A087WWC5 75 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 KIAA1324LA8MWY0 1029 aaPredicted RBP12.25□□□□□ -0.45
CCDC43-203ENST00000588210 SHISA9B4DS77 424 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 H3BQ15 152 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 TXNL1O43396 289 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 S100A9P06702 114 aaKnown RBP12.25□□□□□ -0.45
CCDC43-203ENST00000588210 CELA3BP08861 270 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 RAB2AP61019 212 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 ZNF672Q499Z4 452 aaPredicted RBP12.25□□□□□ -0.45
CCDC43-203ENST00000588210 HEPN1Q6WQI6 88 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 RBMS3Q6XE24 437 aaKnown RBP12.25□□□□□ -0.45
CCDC43-203ENST00000588210 GPR146Q96CH1 333 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 ZNF488Q96MN9 340 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 RAB40CQ96S21 281 aa12.25□□□□□ -0.45
CCDC43-203ENST00000588210 NXPH3O95157 252 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 OR8U8P0C7N1 319 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 WNT5AP41221 380 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 RPL23AP62750 156 aaKnown RBP12.24□□□□□ -0.45
CCDC43-203ENST00000588210 HAGHQ16775 308 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 MOB1BQ7L9L4 216 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 MYPOPQ86VE0 399 aaPredicted RBP12.24□□□□□ -0.45
CCDC43-203ENST00000588210 CLDND2Q8NHS1 167 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 RAB39BQ96DA2 213 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 ZNF251Q9BRH9 671 aa12.24□□□□□ -0.45
CCDC43-203ENST00000588210 TRAV1-1A0A0B4J248 108 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 HS3ST1O14792 307 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 LILRA1O75019 489 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 IFNA17P01571 189 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 MDH2P40926 338 aaKnown RBP12.23□□□□□ -0.45
CCDC43-203ENST00000588210 OR10V1Q8NGI7 309 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 NANPQ8TBE9 248 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 RDH5Q92781 318 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 LSM10Q969L4 123 aaKnown RBP12.23□□□□□ -0.45
CCDC43-203ENST00000588210 UBTD1Q9HAC8 227 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 CISD1Q9NZ45 108 aaKnown RBP12.23□□□□□ -0.45
CCDC43-203ENST00000588210 SETXQ7Z333 2677 aaKnown RBP12.23□□□□□ -0.45
CCDC43-203ENST00000588210 HEATR1Q9H583 2144 aaKnown RBP12.23□□□□□ -0.45
CCDC43-203ENST00000588210 CADP27708 2225 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 J3QT63 122 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 AP4M1O00189 453 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 SLC33A1O00400 549 aaPredicted RBP12.23□□□□□ -0.45
CCDC43-203ENST00000588210 SERPINE2P07093 398 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 PSG2P11465 335 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 APLNRP35414 380 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 KHDC3LQ587J8 217 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 OR10G4Q8NGN3 311 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 OR51I2Q9H344 312 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 TREM2Q9NZC2 230 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 WSB1Q9Y6I7 421 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 APCP25054 2843 aa12.23□□□□□ -0.45
CCDC43-203ENST00000588210 IGHV2OR16-5A0A0B4J2B6 119 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms