RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 COX5AP20674 150 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 RPL12P30050 165 aaKnown RBP8.2□□□□□ -1.1
LINC01539-201ENST00000587904 UCP3P55916 312 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 TMEM50BP56557 158 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 C1QL2Q7Z5L3 287 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 ARHGAP5-AS1Q96IT6 56 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 Q96M66 194 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 BET1LQ9NYM9 111 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 CDC42EP3Q9UKI2 254 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 RNF115Q9Y4L5 304 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 A0A1W2PP11 408 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 ZNF320A2RRD8 509 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 CCNOP22674 350 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 BLVRBP30043 206 aaPredicted RBP8.2□□□□□ -1.1
LINC01539-201ENST00000587904 FCGR2CP31995 323 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 PTGER4P35408 488 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 COMPP49747 757 aaPredicted RBP8.2□□□□□ -1.1
LINC01539-201ENST00000587904 P2RY6Q15077 328 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 MMDQ15546 238 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 TBC1D28Q2M2D7 210 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 VAX1Q5SQQ9 334 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 CLEC18BQ6UXF7 455 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 ZNF66Q6ZN08 573 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 MDP1Q86V88 176 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 PINX1Q96BK5 328 aaKnown RBP8.2□□□□□ -1.1
LINC01539-201ENST00000587904 TAAR6Q96RI8 345 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 HSF4Q9ULV5 492 aa8.2□□□□□ -1.1
LINC01539-201ENST00000587904 FREM1Q5H8C1 2179 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 TNRC6AQ8NDV7 1962 aaKnown RBP8.19□□□□□ -1.1
LINC01539-201ENST00000587904 IGKV1-27A0A075B6S5 117 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 K7N7A8 449 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 CORTO00230 105 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 PRH1P02810 166 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 TAS2R46P59540 309 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 RAB32Q13637 225 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 ARFRP1Q13795 201 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 RSPO4Q2I0M5 234 aaPredicted RBP8.19□□□□□ -1.1
LINC01539-201ENST00000587904 TPTE2P1Q5T6R2 138 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 SAMD13Q5VXD3 122 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 INO80CQ6PI98 192 aaPredicted RBP8.19□□□□□ -1.1
LINC01539-201ENST00000587904 PET117Q6UWS5 81 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 ZDHHC23Q8IYP9 409 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 SAXO1Q8IYX7 474 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 PIGCQ92535 297 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 RARRES2Q99969 163 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 PECRQ9BY49 303 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 TMEM106BQ9NUM4 274 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 OR6C3Q9NZP0 311 aa8.19□□□□□ -1.1
LINC01539-201ENST00000587904 C14orf166Q9Y224 244 aaKnown RBP8.19□□□□□ -1.1
LINC01539-201ENST00000587904 MBD3L4A6NDZ8 208 aaPredicted RBP8.18□□□□□ -1.1
LINC01539-201ENST00000587904 MBD3L3A6NE82 208 aaPredicted RBP8.18□□□□□ -1.1
LINC01539-201ENST00000587904 MBD3L5A6NJ08 208 aaPredicted RBP8.18□□□□□ -1.1
LINC01539-201ENST00000587904 OR5B21A6NL26 309 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 SFT2D2O95562 160 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 IGHV1-2P23083 117 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 HRH1P35367 487 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 P2RY1P47900 373 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 LGALS7P47929 136 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 RND3P61587 244 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 PAFAH1B2P68402 229 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 CEACAM21Q3KPI0 293 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 ACTL10Q5JWF8 245 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 HOGA1Q86XE5 327 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 C17orf78Q8N4C9 275 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 C9orf106Q8NAJ2 232 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 MBD3L2Q8NHZ7 208 aaPredicted RBP8.18□□□□□ -1.1
LINC01539-201ENST00000587904 SDSLQ96GA7 329 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 ABHD14AQ9BUJ0 271 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 OBP2BQ9NPH6 170 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
LINC01539-201ENST00000587904 WIPI2Q9Y4P8 454 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 MPC1Q9Y5U8 109 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 WSB1Q9Y6I7 421 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A10PA6NDY2 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A18PA6NE21 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A16PA6NEW6 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A20PA6NIJ5 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A8PA6NJQ4 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A7PA6NKC0 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 ZNF850A8MQ14 1090 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A22PA8MWA6 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A12PA8MX19 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A5PA8MXJ8 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A23PA8MXZ1 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 SLC25A17O43808 307 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 RAD51DO75771 328 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 TOX4O94842 621 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A15PP0C7V4 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A13PP0C7W8 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A14PP0C7W9 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM90A24PP0C7X0 464 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 PPP1CCP36873 323 aaKnown RBP8.18□□□□□ -1.1
LINC01539-201ENST00000587904 KIR2DL2P43627 348 aaPredicted RBP8.18□□□□□ -1.1
LINC01539-201ENST00000587904 GABRA6Q16445 453 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 TMEM128Q5BJH2 165 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 FAM219AQ8IW50 185 aa8.18□□□□□ -1.1
LINC01539-201ENST00000587904 SELENOHQ8IZQ5 122 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms