RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 UFSP2Q9NUQ7 469 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 OR6C3Q9NZP0 311 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 PPP1R3CQ9UQK1 317 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 OR2W1Q9Y3N9 320 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 TRAV38-1A0A0B4J264 116 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 C5orf51A6NDU8 294 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 F5H0A9 414 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 BET1O15155 118 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 SPINT2O43291 252 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 CYB5R3P00387 301 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 LHBP01229 141 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 PRB2P02812 416 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 SCTP09683 121 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 SLC25A4P12235 298 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 RPA2P15927 270 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 GZMHP20718 246 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 AADACP22760 399 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 NFYAP23511 347 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 PRDX2P32119 198 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 NUP62P37198 522 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 GABRA2P47869 451 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 LUMP51884 338 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 NKX2-5P52952 324 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 H2BFSP57053 126 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 PAX2Q02962 417 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 COL10A1Q03692 680 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 ATXN7L3Q14CW9 347 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 PDCD1Q15116 288 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 KRBOX4Q5JUW0 171 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 TMEM65Q6PI78 240 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 ZNF826PQ6ZT77 177 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 H1FOOQ8IZA3 346 aaPredicted RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 GCSAMQ8N6F7 178 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 IL22RA2Q969J5 263 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 TMEM246Q9BRR3 403 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 SLC5A7Q9GZV3 580 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 TOLLIPQ9H0E2 274 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 METTL8Q9H825 291 aaKnown RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 GCM1Q9NP62 436 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 LIN7CQ9NUP9 197 aaKnown RBP6.42□□□□□ -1.38
VMP1-204ENST00000587259 ZNF581Q9P0T4 197 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 PIPOXQ9P0Z9 390 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 TMED3Q9Y3Q3 217 aa6.42□□□□□ -1.38
VMP1-204ENST00000587259 A0A0D9SG52 128 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 H0Y980 276 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 L7N2F9 121 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 MPPED1O15442 326 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 NDUFA2O43678 99 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 ATG12O94817 140 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 OR2F2O95006 317 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 FSTL3O95633 263 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 TSPAN15O95858 294 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 IFNA7P01567 189 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 PSG2P11465 335 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 RPS2P15880 293 aaKnown RBP6.41□□□□□ -1.38
VMP1-204ENST00000587259 OR3A1P47881 315 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 SUPT4H1P63272 117 aaKnown RBP6.41□□□□□ -1.38
VMP1-204ENST00000587259 HTD2P86397 168 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 PAX8Q06710 450 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 OR2F1Q13607 317 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 SMCO1Q147U7 214 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 HERPUD1Q15011 391 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 IGSF11Q5DX21 431 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 LY6G6FQ5SQ64 297 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 XP32Q5T750 250 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 SAMD5Q5TGI4 173 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 TEX36Q5VZQ5 186 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 C11orf87Q6NUJ2 197 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 LYPD2Q6UXB3 125 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 TCTEX1D1Q8N7M0 179 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 INO80EQ8NBZ0 244 aaPredicted RBP6.41□□□□□ -1.38
VMP1-204ENST00000587259 BVESQ8NE79 360 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 OR10V1Q8NGI7 309 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 PLPPR1Q8TBJ4 325 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 IL1F10Q8WWZ1 152 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 SDSLQ96GA7 329 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 ABHD14BQ96IU4 210 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 C2orf50Q96LR7 162 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 TAF9BQ9HBM6 251 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 FAM212BQ9NTI7 297 aaPredicted RBP6.41□□□□□ -1.38
VMP1-204ENST00000587259 C1RLQ9NZP8 487 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 JPT1Q9UK76 154 aa6.41□□□□□ -1.38
VMP1-204ENST00000587259 RBM7Q9Y580 266 aaKnown RBP6.41□□□□□ -1.38
VMP1-204ENST00000587259 PPIAL4EA0A075B759 164 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 FXYD6-FXYD2A0A087WZ82 144 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PPIAL4CA0A0B4J2A2 164 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 IGHV2-70DA0A0C4DH43 119 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 C3orf85A0A1B0GTC6 90 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 A8MXK9 166 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 FAM25EA8MYX2 175 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PPIAL4DF5H284 164 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 TMEM178BH3BS89 294 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.4□□□□□ -1.38
VMP1-204ENST00000587259 K7N7A8 449 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PSPNO60542 156 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 ZNF737O75373 536 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 CDS2O95674 445 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 RLN2P04090 185 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 OR5AC1P0C628 307 aa6.4□□□□□ -1.38
VMP1-204ENST00000587259 PPIAL4FP0DN26 164 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms