RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	GSTT2B	P0CG30	244 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	SCAND1	P57086	179 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	ARFRP1	Q13795	201 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	ARL6IP1	Q15041	203 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGSF11	Q5DX21	431 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	FOXB2	Q5VYV0	432 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760		Q6ZS49	121 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR5AN1	Q8NGI8	311 aa		10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	ZNF107	Q9UII5	783 aa	Predicted RBP	10.45	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGKV1D-8	A0A087WSZ0	117 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	BET1	O15155	118 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	RRP9	O43818	475 aa	Known RBP	10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	DTYMK	P23919	212 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	C5orf64	Q2M2E5	130 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	TEX38	Q6PEX7	206 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	ETV3L	Q6ZN32	361 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	RNF152	Q8N8N0	203 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	WFDC9	Q8NEX5	89 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	TSPAN14	Q8NG11	270 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	SLC25A38	Q96DW6	304 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	GON7	Q9BXV9	100 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	RHBDL2	Q9NX52	303 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	ZNF221	Q9UK13	617 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	RNF150	Q9ULK6	438 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	WASHC3	Q9Y3C0	194 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760	ETV7	Q9Y603	341 aa		10.44	□□□□□ -0.74
SREBF1-223	ENST00000584760		A0A087WXM4	84 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGHV7-81	A0A0B4J1V7	117 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	TMEM235	A6NFC5	223 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	TRIM64C	A6NLI5	447 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	SCGN	O76038	276 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGHG4	P01861	327 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	PF4	P02776	101 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	GSTP1	P09211	210 aa	Known RBP	10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	MC5R	P33032	325 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	TALDO1	P37837	337 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	TIMM50	Q3ZCQ8	353 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	ZNF260	Q3ZCT1	412 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	HACD4	Q5VWC8	232 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	C18orf65	Q6ZTR6	163 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	ZNF383	Q8NA42	475 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR5H6	Q8NGV6	325 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR10J5	Q8NHC4	309 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	NUDCD2	Q8WVJ2	157 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	YIPF6	Q96EC8	236 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	C5orf30	Q96GV9	206 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR2D2	Q9H210	308 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	ZFP57	Q9NU63	452 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	RYR3	Q15413	4870 aa		10.43	□□□□□ -0.74
SREBF1-223	ENST00000584760	RRH	O14718	337 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	ATP6V0E1	O15342	81 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	RBBP9	O75884	186 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGKV1-16	P04430	117 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	TFAP2A	P05549	437 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR8U9	P0C7N5	309 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	CD33	P20138	364 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	VDAC1	P21796	283 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	SLC6A1	P30531	599 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	TGFBR1	P36897	503 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	LINC00205	P59089	165 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	NDP	Q00604	133 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	FOXE3	Q13461	319 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	PNLIPRP3	Q17RR3	467 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	CDNF	Q49AH0	187 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	DEFB121	Q5J5C9	76 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	IDNK	Q5T6J7	187 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	LCNL1	Q6ZST4	164 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	C8orf86	Q6ZUL3	223 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	LINC00482	Q8N8I6	264 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	KLHL30-AS1	Q8NEE0	82 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR8U1	Q8NH10	309 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR51J1	Q9H342	316 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	FBXL15	Q9H469	300 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	VCX3A	Q9NNX9	186 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	KIAA1456	Q9P272	454 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760	GAB2	Q9UQC2	676 aa		10.42	□□□□□ -0.74
SREBF1-223	ENST00000584760		H7C2Y5	167 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760		K7EIL1	84 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760		M0R1X1	148 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	SSX5	O60225	188 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	TMEM127	O75204	238 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	RPLP1	P05386	114 aa	Known RBP	10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	ELANE	P08246	267 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	OR5H8	P0DN80	308 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	IGLL1	P15814	213 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	PSMB8	P28062	276 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	THBS3	P49746	956 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	PITPNA	Q00169	270 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	LIN54	Q6MZP7	749 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	PDPN	Q86YL7	162 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	MYOZ3	Q8TDC0	251 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	RNF5	Q99942	180 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	GINS4	Q9BRT9	223 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	DCSTAMP	Q9H295	470 aa		10.41	□□□□□ -0.74
SREBF1-223	ENST00000584760	PARP11	Q9NR21	331 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms