RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MS4A5Q9H3V2 200 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 RPL27AP46776 148 aaKnown RBP11.28□□□□□ -0.6
RNF43-208ENST00000584437 LCN2P80188 198 aa11.28□□□□□ -0.6
RNF43-208ENST00000584437 LOC105371267A0A1B0GV96 52 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 MC5RP33032 325 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 SOX8P57073 446 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 MDP1Q86V88 176 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 SAXO1Q8IYX7 474 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 OR52M1Q8NGK5 317 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 OR2I1PQ8NGU4 316 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 HIST1H4GQ99525 98 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 MAP1LC3AQ9H492 121 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.6
RNF43-208ENST00000584437 C21orf140B9A014 251 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 TNFRSF9Q07011 255 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 ADIPOQQ15848 244 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.6
RNF43-208ENST00000584437 PEF1Q9UBV8 284 aaKnown RBP11.27□□□□□ -0.6
RNF43-208ENST00000584437 KIF13BQ9NQT8 1826 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 C8orf88P0DMB2 117 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 ID1P41134 155 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 TMEM187Q14656 261 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 C2orf68Q2NKX9 166 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 MIC13Q5XKP0 118 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 TMEM136Q6ZRR5 245 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 ZNF488Q96MN9 340 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 PGPA6NDG6 321 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 MMD2Q8IY49 270 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 MUC15Q8N387 334 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 SFRP2Q96HF1 295 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 PKIBQ9C010 78 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 EFNB1P98172 346 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 FAM206AQ9NX38 181 aa11.27□□□□□ -0.61
RNF43-208ENST00000584437 CDK5RAP2Q96SN8 1893 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 SCN9AQ15858 1988 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 TSPAN2O60636 221 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 ZNF708P17019 499 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 ERVFRD-1P60508 538 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 RPL31P62899 125 aaKnown RBP11.26□□□□□ -0.61
RNF43-208ENST00000584437 MMDQ15546 238 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 TMEM78Q5T7P6 136 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 KLK10O43240 276 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 ID4P47928 161 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 TMEM14DPA8MWL7 114 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 CA7P43166 264 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 UNC119Q13432 240 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 TTC32Q5I0X7 151 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 ZNF600Q6ZNG1 722 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 Q96M66 194 aa11.26□□□□□ -0.61
RNF43-208ENST00000584437 ZNF729A6NN14 1252 aaPredicted RBP11.26□□□□□ -0.61
RNF43-208ENST00000584437 TRIP11Q15643 1979 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
RNF43-208ENST00000584437 OR2H2O95918 312 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 WFIKKN1Q96NZ8 548 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 SLC25A10Q9UBX3 287 aaPredicted RBP11.25□□□□□ -0.61
RNF43-208ENST00000584437 MYO7AQ13402 2215 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 A0A0J9YW62 118 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 J3KRW8 73 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 ARL14EPLP0DKL9 152 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 SCGB1A1P11684 91 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 TMEM177Q53S58 311 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 TCF24Q7RTU0 167 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 DNAJC4Q9NNZ3 241 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 AGFG2O95081 481 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 ZP1P60852 638 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 RND1Q92730 232 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 DOCK1Q14185 1865 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 CSRP3P50461 194 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 NUBP1P53384 320 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 ATP5IP56385 69 aaPredicted RBP11.25□□□□□ -0.61
RNF43-208ENST00000584437 HSPE1P61604 102 aaKnown RBP11.25□□□□□ -0.61
RNF43-208ENST00000584437 RPL8P62917 257 aaKnown RBP11.25□□□□□ -0.61
RNF43-208ENST00000584437 A0A087WWC5 75 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 IGKV1-8A0A0C4DH67 115 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 MPV17P39210 176 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 JOSD1Q15040 202 aaPredicted RBP11.25□□□□□ -0.61
RNF43-208ENST00000584437 HES3Q5TGS1 186 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 PGLYRP4Q96LB8 373 aa11.25□□□□□ -0.61
RNF43-208ENST00000584437 MRPL32Q9BYC8 188 aaKnown RBP11.25□□□□□ -0.61
RNF43-208ENST00000584437 A0A1B0GV72 72 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 DPRXA6NFQ7 191 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
RNF43-208ENST00000584437 NPBWR2P48146 333 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 C3AR1Q16581 482 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 DIRC2Q96SL1 478 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 RP1L1Q8IWN7 2480 aaPredicted RBP11.24□□□□□ -0.61
RNF43-208ENST00000584437 CTAG1AP78358 180 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 LAMTOR1Q6IAA8 161 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 G6PC2Q9NQR9 355 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 IGHV3OR15-7A0A075B7D8 119 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 FAM90A27PA6NNH2 459 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 SPINT1O43278 529 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 LIPFP07098 398 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 ZNF658BQ4V348 819 aaPredicted RBP11.24□□□□□ -0.61
RNF43-208ENST00000584437 COPS9Q8WXC6 57 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 ZNF714Q96N38 554 aa11.24□□□□□ -0.61
RNF43-208ENST00000584437 WFDC6Q9BQY6 131 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms